Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU1-115P-201ENST00000365329 160 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 RNU6-326P-201ENST00000365480 107 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 SNORD115-46-201ENST00000390982 71 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 RNU2-35P-201ENST00000516446 142 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 SNORD116-25-201ENST00000516517 92 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 RNU2-4P-201ENST00000606190 192 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 MIR6773-201ENST00000612812 74 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 MIR409-201ENST00000362237 79 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 RNU6-728P-201ENST00000365375 104 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 RNU6-472P-201ENST00000384299 107 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 RNU4-69P-201ENST00000410677 143 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 RNU6-561P-201ENST00000516222 102 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 AC104985.2-201ENST00000620598 500 ntBASIC-1.8□□□□□ -2.7
VPS29Q9UBQ0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 RNU6-845P-201ENST00000362578 103 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 RNU6-978P-201ENST00000364371 103 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 SNORD116-1-201ENST00000384335 95 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 MIR1277-201ENST00000408536 78 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 RNU7-2P-201ENST00000516096 62 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 AC002553.4-201ENST00000616896 331 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 AC112487.2-201ENST00000637950 304 ntBASIC-1.81□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 RNU6-690P-201ENST00000365242 106 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 MIRLET7B-201ENST00000385140 83 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 RNU4-43P-201ENST00000410628 137 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 AC113139.1-201ENST00000605049 239 ntBASIC-1.82□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 RNU6-54P-201ENST00000365563 107 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 MIR216B-201ENST00000390186 82 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 SNORD77B-201ENST00000391112 67 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 AC026421.1-201ENST00000519101 163 ntBASIC-1.83□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 SNORD27-201ENST00000363981 72 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 RNU6-337P-201ENST00000391243 106 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 HLA-S-202ENST00000425174 53 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 MTND4LP32-201ENST00000636111 270 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.84□□□□□ -2.7
VPS29Q9UBQ0 UBE2WP1-201ENST00000362030 340 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 SNORD114-4-201ENST00000363962 75 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 SNORA62.4-201ENST00000365504 151 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 RNY4P36-201ENST00000391116 96 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 RNU6-243P-201ENST00000391140 107 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.85□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.86□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.86□□□□□ -2.71
VPS29Q9UBQ0 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.86□□□□□ -2.71
VPS29Q9UBQ0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.86□□□□□ -2.71
VPS29Q9UBQ0 RNA5SP461-201ENST00000516451 104 ntBASIC-1.86□□□□□ -2.71
VPS29Q9UBQ0 RNU6-957P-201ENST00000363652 99 ntBASIC-1.87□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.87□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.87□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.87□□□□□ -2.71
VPS29Q9UBQ0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.87□□□□□ -2.71
VPS29Q9UBQ0 SNORD36A-201ENST00000362874 73 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 SNORD116-29-201ENST00000384516 83 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 MIR34C-201ENST00000384831 77 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 RNA5SP266-201ENST00000410273 108 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 AC069439.1-201ENST00000494739 167 ntBASIC-1.88□□□□□ -2.71
VPS29Q9UBQ0 SNORD101-201ENST00000384027 73 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 MIR8485-201ENST00000401372 91 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 SNORD42B-201ENST00000458893 67 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 RNU6-718P-201ENST00000516166 105 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 AC068339.1-201ENST00000526965 141 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.89□□□□□ -2.71
VPS29Q9UBQ0 RNU6-208P-201ENST00000362431 107 ntBASIC-1.9□□□□□ -2.71
VPS29Q9UBQ0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS29Q9UBQ0 MIR4696-201ENST00000581431 70 ntBASIC-1.9□□□□□ -2.71
VPS29Q9UBQ0 AP000770.2-201ENST00000623694 100 ntBASIC-1.9□□□□□ -2.71
VPS29Q9UBQ0 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.91□□□□□ -2.72
VPS29Q9UBQ0 RNU6-616P-201ENST00000384353 107 ntBASIC-1.91□□□□□ -2.72
VPS29Q9UBQ0 RNU6-576P-201ENST00000390854 102 ntBASIC-1.91□□□□□ -2.72
VPS29Q9UBQ0 RNU6-381P-201ENST00000391259 108 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms