Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-363P-201ENST00000362895 105 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 Y_RNA.81-201ENST00000362997 102 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 RNU6-44P-201ENST00000384045 107 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 Y_RNA.448-201ENST00000384185 108 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 SNORD116-21-201ENST00000384507 92 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 RNU6-589P-201ENST00000516485 107 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 AP003327.1-201ENST00000529684 127 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 DEFB131E-201ENST00000532329 154 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 AC105081.1-201ENST00000617727 106 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 PVT1_3.1-201ENST00000620853 95 ntBASIC0.91□□□□□ -2.26
COL20A1Q9P218 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.91□□□□□ -2.26
COL20A1Q9P218 Y_RNA.13-201ENST00000362403 112 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 Y_RNA.85-201ENST00000363014 111 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 RNU4-58P-201ENST00000363192 141 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 RNA5SP133-201ENST00000363368 119 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 Y_RNA.328-201ENST00000365208 113 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 MIR573-201ENST00000384964 99 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 RNY4P18-201ENST00000391107 89 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 RNU6-521P-201ENST00000516663 105 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 Y_RNA.709-201ENST00000516952 92 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 MIR1255B1-201ENST00000636325 63 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 AL162726.3-218ENST00000636401 95 ntBASIC0.9□□□□□ -2.27
COL20A1Q9P218 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL20A1Q9P218 Y_RNA.205-201ENST00000364128 113 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 RNU4-67P-201ENST00000364569 141 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 RNU6-865P-201ENST00000364772 107 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 Y_RNA.507-201ENST00000384500 99 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 RNU6-880P-201ENST00000384526 107 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 Y_RNA.549-201ENST00000384657 102 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 MIR1912-201ENST00000410389 80 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.89□□□□□ -2.27
COL20A1Q9P218 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 RNU6-448P-201ENST00000517052 107 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.89□□□□□ -2.27
COL20A1Q9P218 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
COL20A1Q9P218 SNORA63.4-201ENST00000362763 126 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 Y_RNA.309-201ENST00000365046 111 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 MTATP6P29-201ENST00000415057 132 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.88□□□□□ -2.27
COL20A1Q9P218 AC008608.1-201ENST00000603910 127 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.88□□□□□ -2.27
COL20A1Q9P218 AL035470.1-201ENST00000622571 220 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 AP001362.1-201ENST00000625165 124 ntBASIC0.88□□□□□ -2.27
COL20A1Q9P218 Y_RNA.119-201ENST00000363301 96 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 SNORA63.5-201ENST00000363548 123 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 Y_RNA.281-201ENST00000364774 94 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-409P-201ENST00000384114 104 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-816P-201ENST00000390914 107 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-1307P-201ENST00000391012 103 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-1268P-201ENST00000391214 107 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-1239P-201ENST00000391310 107 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 AC244098.3-201ENST00000424803 96 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-412P-201ENST00000516434 106 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 RNU6-1018P-201ENST00000516577 106 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 SNORA25.16-201ENST00000516741 121 ntBASIC0.87□□□□□ -2.27
COL20A1Q9P218 Y_RNA.49-201ENST00000362714 112 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 RNA5SP117-201ENST00000365294 118 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 SNORD100-201ENST00000408573 76 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 MIR376B-201ENST00000614515 100 ntBASIC0.86□□□□□ -2.27
COL20A1Q9P218 RNU6-1313P-201ENST00000362622 102 ntBASIC0.85□□□□□ -2.27
COL20A1Q9P218 RNU6-531P-201ENST00000516694 104 ntBASIC0.85□□□□□ -2.27
COL20A1Q9P218 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
COL20A1Q9P218 Y_RNA.155-201ENST00000363632 101 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 Y_RNA.174-201ENST00000363781 105 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 RNU6-755P-201ENST00000364400 103 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 RNU6-153P-201ENST00000364422 104 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 RNU6-1107P-201ENST00000364817 104 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 Y_RNA.360-201ENST00000365512 102 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 SNORA7.5-201ENST00000410672 110 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 RNU6-733P-201ENST00000410759 104 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 MIR3612-201ENST00000579753 87 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 uc_338.28-201ENST00000612082 187 ntBASIC0.84□□□□□ -2.27
COL20A1Q9P218 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 MIR101-2-201ENST00000362195 79 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 U8.6-201ENST00000364939 135 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 SNORD38.2-201ENST00000384470 69 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 RNY1P4-201ENST00000384595 115 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 RNU6-679P-201ENST00000391003 106 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 AC068339.1-201ENST00000526965 141 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 RN7SL793P-201ENST00000583259 296 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 AL512310.12-203ENST00000640543 90 ntBASIC0.83□□□□□ -2.28
COL20A1Q9P218 Y_RNA.56-201ENST00000362798 112 ntBASIC0.82□□□□□ -2.28
COL20A1Q9P218 Y_RNA.323-201ENST00000365157 109 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms