Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU4-83P-201ENST00000410863 133 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 RNU6-850P-201ENST00000516934 103 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 AP003327.1-201ENST00000529684 127 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 MIR4491-201ENST00000581087 68 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 MIR6504-201ENST00000613520 61 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 MIR8066-201ENST00000617280 78 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
TMEM39AQ9NV64 SNORA31.2-201ENST00000516019 134 ntBASIC1.85□□□□□ -2.11
TMEM39AQ9NV64 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
TMEM39AQ9NV64 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TMEM39AQ9NV64 Y_RNA.57-201ENST00000362806 113 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 RNU1-36P-201ENST00000365130 165 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 RNU6-571P-201ENST00000384128 107 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 snoU13.21-201ENST00000459368 105 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.84□□□□□ -2.11
TMEM39AQ9NV64 RNU6-403P-201ENST00000363163 104 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.191-201ENST00000363972 113 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.219-201ENST00000364232 113 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 SNORD113.3-201ENST00000364630 78 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 RNU6-53P-201ENST00000365367 106 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 SNORA72.6-201ENST00000384520 129 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.588-201ENST00000391254 102 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 RNU6-531P-201ENST00000516694 104 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 SNORA25.16-201ENST00000516741 121 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 MIR5588-201ENST00000581890 63 ntBASIC1.83□□□□□ -2.12
TMEM39AQ9NV64 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 RNU6-1276P-201ENST00000365372 104 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 SNORA75.2-201ENST00000391138 150 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 SNORA75.3-201ENST00000391231 150 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 RNU7-185P-201ENST00000459215 60 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 RNU6-902P-201ENST00000517212 91 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 AC023934.1-201ENST00000574529 2389 ntBASIC1.82□□□□□ -2.12
TMEM39AQ9NV64 RNU4-58P-201ENST00000363192 141 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 RNU6-979P-201ENST00000383896 107 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 SNORD78.1-201ENST00000390866 65 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 SNORD83.1-201ENST00000411362 77 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 AL161932.1-201ENST00000437408 146 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 AC036111.3-201ENST00000526389 112 ntBASIC1.81□□□□□ -2.12
TMEM39AQ9NV64 RNU6-633P-201ENST00000362612 103 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.363-201ENST00000365529 113 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 MIR1257-201ENST00000408490 117 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.611-201ENST00000410682 108 ntBASIC1.8□□□□□ -2.12
TMEM39AQ9NV64 RNU6-509P-201ENST00000363519 107 ntBASIC1.79□□□□□ -2.12
TMEM39AQ9NV64 RNU6-934P-201ENST00000365154 107 ntBASIC1.79□□□□□ -2.12
TMEM39AQ9NV64 RNU6-519P-201ENST00000410590 108 ntBASIC1.79□□□□□ -2.12
TMEM39AQ9NV64 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
TMEM39AQ9NV64 RNU1-92P-201ENST00000517017 135 ntBASIC1.79□□□□□ -2.12
TMEM39AQ9NV64 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 RNU6-1275P-201ENST00000391087 107 ntBASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 AL591704.2-201ENST00000421658 181 ntBASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 MIR548BB-201ENST00000626714 66 ntBASIC1.78□□□□□ -2.12
TMEM39AQ9NV64 Y_RNA.426-201ENST00000384068 113 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 RNU6-1124P-201ENST00000384169 107 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 AC015818.7-201ENST00000428754 109 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 AC087499.7-201ENST00000441958 109 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 Y_RNA.685-201ENST00000516532 108 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 AC023827.1-201ENST00000569247 97 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 MIR4452-201ENST00000583004 71 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 ZNF209P-201ENST00000593450 2304 ntBASIC1.77□□□□□ -2.13
TMEM39AQ9NV64 RNU6-42P-201ENST00000384165 107 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 RNU6-910P-201ENST00000390844 107 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 SNORD111-201ENST00000408139 94 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 RNU7-171P-201ENST00000459581 62 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 MIR4771-2-201ENST00000577758 74 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 MIR4771-1-201ENST00000582617 74 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 AC106800.4-201ENST00000614905 153 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 MIR3202-2-201ENST00000635980 79 ntBASIC1.76□□□□□ -2.13
TMEM39AQ9NV64 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 Y_RNA.13-201ENST00000362403 112 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 RNU6-228P-201ENST00000362700 106 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 SNORD115-27-201ENST00000364430 82 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 MIR516A2-201ENST00000384888 90 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 MIR516A1-201ENST00000385033 90 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 RNU1-123P-201ENST00000458950 160 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 MIR4421-201ENST00000578133 69 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 AC013244.2-201ENST00000603396 103 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 AL078603.1-201ENST00000603824 313 ntBASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TMEM39AQ9NV64 MIR101-2-201ENST00000362195 79 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 RNU6-1254P-201ENST00000391266 104 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 RNA5SP102-201ENST00000516865 106 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 MIR6082-201ENST00000613604 109 ntBASIC1.74□□□□□ -2.13
TMEM39AQ9NV64 AC006160.2-201ENST00000637708 154 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms