Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 SNORD116-22-201ENST00000384430 92 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 RNU6-1275P-201ENST00000391087 107 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 RNU7-85P-201ENST00000458851 63 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 RNU7-106P-201ENST00000459514 67 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 AC023934.1-201ENST00000574529 2389 ntBASIC1.2□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.13-201ENST00000362403 112 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 RNU6-403P-201ENST00000363163 104 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR516A2-201ENST00000384888 90 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR516A1-201ENST00000385033 90 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 RNU6-910P-201ENST00000390844 107 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 RNA5SP225-201ENST00000410874 135 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR4771-2-201ENST00000577758 74 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR5588-201ENST00000581890 63 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 MIR4771-1-201ENST00000582617 74 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 IGLL4P-201ENST00000614590 133 ntBASIC1.19□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.57-201ENST00000362806 113 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 SNORD38.2-201ENST00000384470 69 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 SNORA72.6-201ENST00000384520 129 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 MIR1261-201ENST00000408659 82 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 MIR18B-201ENST00000454574 71 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 snoU13.11-201ENST00000459219 104 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 RNU6-548P-201ENST00000517083 115 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 AC013244.2-201ENST00000603396 103 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 MIR548BB-201ENST00000626714 66 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 AC006160.2-201ENST00000637708 154 ntBASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.96-201ENST00000363092 109 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 RNU6-509P-201ENST00000363519 107 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 SNORD113.3-201ENST00000364630 78 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 AL161932.1-201ENST00000437408 146 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 AC106800.4-201ENST00000614905 153 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 ZNF209P-201ENST00000593450 2304 ntBASIC1.17□□□□□ -2.22
NRIP3Q9NQ35 RNU6-633P-201ENST00000362612 103 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.42-201ENST00000362660 108 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 SNORD36A-201ENST00000362874 73 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 RNU6-934P-201ENST00000365154 107 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 RNU6-1276P-201ENST00000365372 104 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 RNU6-524P-201ENST00000384270 107 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 Y_RNA.611-201ENST00000410682 108 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 AC008608.1-201ENST00000603910 127 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.16□□□□□ -2.22
NRIP3Q9NQ35 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU1-17P-201ENST00000363022 152 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU6-571P-201ENST00000384128 107 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU6-1124P-201ENST00000384169 107 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 SNORD78.1-201ENST00000390866 65 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 SNORD100-201ENST00000408573 76 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 AL606490.4-201ENST00000423117 127 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 SNORD4B-201ENST00000459083 72 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU6-75P-201ENST00000515944 104 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU7-153P-201ENST00000516455 62 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 MIR6082-201ENST00000613604 109 ntBASIC1.15□□□□□ -2.23
NRIP3Q9NQ35 RNU6-1125P-201ENST00000363601 107 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 RNA5SP245-201ENST00000364239 121 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 Y_RNA.313-201ENST00000365095 103 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 SNORD63B-201ENST00000411005 70 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 RNA5SP395-201ENST00000516567 118 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
NRIP3Q9NQ35 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 Y_RNA.219-201ENST00000364232 113 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 RNU6-480P-201ENST00000384332 107 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 MIR1255A-201ENST00000408338 113 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 RNU7-195P-201ENST00000458793 62 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
NRIP3Q9NQ35 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 RNU4-58P-201ENST00000363192 141 ntBASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 RNU7-171P-201ENST00000459581 62 ntBASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 RNU1-92P-201ENST00000517017 135 ntBASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.12□□□□□ -2.23
NRIP3Q9NQ35 RNU6-132P-201ENST00000383863 107 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms