Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.61□□□□□ -2.31
SIX2Q9NPC8 AL162726.3-218ENST00000636401 95 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 RNA5SP205-201ENST00000364653 136 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 SNORA7.5-201ENST00000410672 110 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 RPL39P34-201ENST00000477141 156 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 RNU6-479P-201ENST00000516348 105 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 AL078603.1-201ENST00000603824 313 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.355-201ENST00000365462 98 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNU6-535P-201ENST00000384722 107 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNU6-816P-201ENST00000390914 107 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNU6-679P-201ENST00000391003 106 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 MIR1912-201ENST00000410389 80 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 AL353813.1-201ENST00000440700 253 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 RNA5SP220-201ENST00000516298 104 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 MIR4500-201ENST00000579472 76 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 MIR151B-201ENST00000584249 96 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
SIX2Q9NPC8 MIR6788-201ENST00000618842 66 ntBASIC0.59□□□□□ -2.31
SIX2Q9NPC8 MIR101-2-201ENST00000362195 79 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNU6-409P-201ENST00000384114 104 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNU6-1154P-201ENST00000391001 104 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 snoU13.18-201ENST00000459483 104 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNU6-313P-201ENST00000516317 112 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 RNU6-1018P-201ENST00000516577 106 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 SNORA31.14-201ENST00000516728 116 ntBASIC0.58□□□□□ -2.32
SIX2Q9NPC8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
SIX2Q9NPC8 SNORA63.5-201ENST00000363548 123 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 RNU6-42P-201ENST00000384165 107 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 RNU2-51P-201ENST00000410708 197 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 AL606753.1-201ENST00000427435 87 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.57□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.309-201ENST00000365046 111 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 RNU6-1144P-201ENST00000384247 104 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 SNORD116-21-201ENST00000384507 92 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 RNU6-880P-201ENST00000384526 107 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 SNORA19-201ENST00000384737 128 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 MIR548J-201ENST00000408833 112 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 AL512310.12-203ENST00000640543 90 ntBASIC0.56□□□□□ -2.32
SIX2Q9NPC8 RNA5SP245-201ENST00000364239 121 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.281-201ENST00000364774 94 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 RNU6-476P-201ENST00000384726 107 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 MIR644A-201ENST00000385262 94 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 BX276092.1-201ENST00000427368 251 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 AC068339.1-201ENST00000526965 141 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 MIR3678-201ENST00000578455 94 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 MIR548H5-201ENST00000580314 60 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 MIR6734-201ENST00000621166 68 ntBASIC0.55□□□□□ -2.32
SIX2Q9NPC8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.55□□□□□ -2.32
SIX2Q9NPC8 RNU6-834P-201ENST00000362367 110 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 SNORD38.2-201ENST00000384470 69 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 MIR548I2-201ENST00000408348 149 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 RNU6-1064P-201ENST00000410626 104 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 SNRPGP12-201ENST00000449481 213 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 RNU6-469P-201ENST00000516253 101 ntBASIC0.54□□□□□ -2.32
SIX2Q9NPC8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SIX2Q9NPC8 U8.6-201ENST00000364939 135 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 RNU6-571P-201ENST00000384128 107 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
SIX2Q9NPC8 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 RNU6-135P-201ENST00000516769 101 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 RNA5SP94-201ENST00000516917 108 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 MIR5009-201ENST00000578736 100 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 AL442128.1-201ENST00000615151 90 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 AC022709.1-201ENST00000615967 87 ntBASIC0.53□□□□□ -2.32
SIX2Q9NPC8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 SNORD18A-201ENST00000363753 72 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 SNORD38.1-201ENST00000363863 68 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 Y_RNA.377-201ENST00000365644 108 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 TRAJ51-201ENST00000504127 63 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 RNU6-412P-201ENST00000516434 106 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 AC138869.1-201ENST00000568623 124 ntBASIC0.52□□□□□ -2.33
SIX2Q9NPC8 MIR5000-201ENST00000577717 103 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms