Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 Y_RNA.98-201ENST00000363109 102 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 SNORD114-23-201ENST00000363536 72 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HIPK3Q9H422 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 RNU2-51P-201ENST00000410708 197 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 RNU6-765P-201ENST00000516916 99 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
HIPK3Q9H422 RNU6-363P-201ENST00000362895 105 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 RNU4-67P-201ENST00000364569 141 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 Y_RNA.328-201ENST00000365208 113 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 RNU6-531P-201ENST00000516694 104 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 DEFB131E-201ENST00000532329 154 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.82□□□□□ -2.28
HIPK3Q9H422 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 AL035470.1-201ENST00000622571 220 ntBASIC0.82□□□□□ -2.28
HIPK3Q9H422 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HIPK3Q9H422 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HIPK3Q9H422 RNU4-58P-201ENST00000363192 141 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 Y_RNA.119-201ENST00000363301 96 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 Y_RNA.549-201ENST00000384657 102 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 MIR573-201ENST00000384964 99 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 RPL39P34-201ENST00000477141 156 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 AL162726.3-218ENST00000636401 95 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
HIPK3Q9H422 RNA5SP457-201ENST00000363657 124 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-865P-201ENST00000364772 107 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-816P-201ENST00000390914 107 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-1268P-201ENST00000391214 107 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-1239P-201ENST00000391310 107 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 SNORA7.5-201ENST00000410672 110 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-1194P-201ENST00000516208 104 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 RNU6-448P-201ENST00000517052 107 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 MIR376B-201ENST00000614515 100 ntBASIC0.8□□□□□ -2.28
HIPK3Q9H422 Y_RNA.85-201ENST00000363014 111 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 RNU6-1144P-201ENST00000384247 104 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 Y_RNA.507-201ENST00000384500 99 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 SNORD100-201ENST00000408573 76 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 AP003327.1-201ENST00000529684 127 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 AP001362.1-201ENST00000625165 124 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 U2.22-201ENST00000636441 106 ntBASIC0.79□□□□□ -2.28
HIPK3Q9H422 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 SNORA63.5-201ENST00000363548 123 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 Y_RNA.155-201ENST00000363632 101 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-409P-201ENST00000384114 104 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 SNORD116-21-201ENST00000384507 92 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-429P-201ENST00000384582 108 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-476P-201ENST00000384726 107 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 MIR34C-201ENST00000384831 77 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-679P-201ENST00000391003 106 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 MIR1912-201ENST00000410389 80 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-1064P-201ENST00000410626 104 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 AC002350.1-201ENST00000490759 375 ntBASIC0.78□□□□□ -2.28
HIPK3Q9H422 RNU6-834P-201ENST00000362367 110 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 Y_RNA.115-201ENST00000363272 98 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 Y_RNA.309-201ENST00000365046 111 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 Y_RNA.360-201ENST00000365512 102 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 RNU6-880P-201ENST00000384526 107 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 AL353813.1-201ENST00000440700 253 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 Y_RNA.697-201ENST00000516776 113 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 MIR4711-201ENST00000578274 70 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 MIR4500-201ENST00000579472 76 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 MIR3612-201ENST00000579753 87 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 MIR924-201ENST00000638017 53 ntBASIC0.77□□□□□ -2.29
HIPK3Q9H422 Y_RNA.35-201ENST00000362601 101 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 RNU6-1081P-201ENST00000384537 107 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 Y_RNA.536-201ENST00000384621 113 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 RNU6-733P-201ENST00000410759 104 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 RNU6-1018P-201ENST00000516577 106 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.76□□□□□ -2.29
HIPK3Q9H422 AL512310.12-203ENST00000640543 90 ntBASIC0.76□□□□□ -2.29
HIPK3Q9H422 RNU6-1313P-201ENST00000362622 102 ntBASIC0.75□□□□□ -2.29
HIPK3Q9H422 Y_RNA.281-201ENST00000364774 94 ntBASIC0.75□□□□□ -2.29
HIPK3Q9H422 RNU6-1056P-201ENST00000383996 107 ntBASIC0.75□□□□□ -2.29
HIPK3Q9H422 AC068339.1-201ENST00000526965 141 ntBASIC0.75□□□□□ -2.29
HIPK3Q9H422 MIR101-2-201ENST00000362195 79 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 RNA5SP117-201ENST00000365294 118 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 RNU6-291P-201ENST00000384720 107 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 RNU6-535P-201ENST00000384722 107 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 MIR548I2-201ENST00000408348 149 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.74□□□□□ -2.29
HIPK3Q9H422 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
HIPK3Q9H422 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.74□□□□□ -2.29
HIPK3Q9H422 MIR18A-201ENST00000362310 71 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 Y_RNA.49-201ENST00000362714 112 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 Y_RNA.258-201ENST00000364613 105 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 U8.6-201ENST00000364939 135 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 RNA5SP222-201ENST00000411039 105 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms