Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 RNY3P2-201ENST00000362918 102 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 SNORD38.1-201ENST00000363863 68 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 RNU4-36P-201ENST00000364294 144 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 RNY4P18-201ENST00000391107 89 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 SNORD99-201ENST00000408612 74 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 SPINT5P-201ENST00000448174 155 ntBASIC1.19□□□□□ -2.22
CCDC113Q9H0I3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 RNA5SP117-201ENST00000365294 118 ntBASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 AL035461.1-201ENST00000421490 332 ntBASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
CCDC113Q9H0I3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 MIR577-201ENST00000385196 96 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 AL353813.1-201ENST00000440700 253 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 AP003327.1-201ENST00000529684 127 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 RNU6-90P-201ENST00000606352 106 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 MIR6767-201ENST00000637302 66 ntBASIC1.17□□□□□ -2.22
CCDC113Q9H0I3 RNU6-832P-201ENST00000363319 107 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 BX276092.1-201ENST00000427368 251 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
CCDC113Q9H0I3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.15□□□□□ -2.23
CCDC113Q9H0I3 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.15□□□□□ -2.23
CCDC113Q9H0I3 MIR548H5-201ENST00000580314 60 ntBASIC1.15□□□□□ -2.23
CCDC113Q9H0I3 RNU7-10P-201ENST00000607194 63 ntBASIC1.15□□□□□ -2.23
CCDC113Q9H0I3 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.14□□□□□ -2.23
CCDC113Q9H0I3 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
CCDC113Q9H0I3 uc_338.28-201ENST00000612082 187 ntBASIC1.14□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 SNORA51.5-201ENST00000384126 131 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 RNU6-106P-201ENST00000384405 107 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 MIR635-201ENST00000384830 98 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 MIR573-201ENST00000384964 99 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
CCDC113Q9H0I3 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 RNU6-44P-201ENST00000384045 107 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 SNORD100-201ENST00000408573 76 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 RNU6-554P-201ENST00000410466 106 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 AL031737.1-201ENST00000450125 223 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 ACA64.5-201ENST00000516207 127 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
CCDC113Q9H0I3 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 SNORD45B-201ENST00000364617 72 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 RNU6-571P-201ENST00000384128 107 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 MIR499A-201ENST00000384903 122 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 AC002350.1-201ENST00000490759 375 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.11□□□□□ -2.23
CCDC113Q9H0I3 SNORA63.4-201ENST00000362763 126 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 RNU6-756P-201ENST00000383997 107 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 RNU6-469P-201ENST00000516253 101 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
CCDC113Q9H0I3 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
CCDC113Q9H0I3 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
CCDC113Q9H0I3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.09□□□□□ -2.23
CCDC113Q9H0I3 RNU6-850P-201ENST00000516934 103 ntBASIC1.09□□□□□ -2.23
CCDC113Q9H0I3 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
CCDC113Q9H0I3 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
CCDC113Q9H0I3 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
CCDC113Q9H0I3 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
CCDC113Q9H0I3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.07□□□□□ -2.24
CCDC113Q9H0I3 AC138907.6-201ENST00000568401 126 ntBASIC1.07□□□□□ -2.24
CCDC113Q9H0I3 AC138869.1-201ENST00000568623 124 ntBASIC1.07□□□□□ -2.24
CCDC113Q9H0I3 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 RNU6-170P-201ENST00000362832 104 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 RNU6-755P-201ENST00000364400 103 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 SNRPGP12-201ENST00000449481 213 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 SCARNA23-201ENST00000516060 130 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 RNU6-904P-201ENST00000516206 101 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 SNORA31.14-201ENST00000516728 116 ntBASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC113Q9H0I3 MIR450A1-201ENST00000362262 91 ntBASIC1.05□□□□□ -2.24
CCDC113Q9H0I3 SNORA19.1-201ENST00000410656 129 ntBASIC1.05□□□□□ -2.24
CCDC113Q9H0I3 AC092628.1-201ENST00000436250 252 ntBASIC1.05□□□□□ -2.24
CCDC113Q9H0I3 MIR3613-201ENST00000579844 87 ntBASIC1.05□□□□□ -2.24
CCDC113Q9H0I3 uc_338.16-201ENST00000621804 95 ntBASIC1.05□□□□□ -2.24
CCDC113Q9H0I3 RNU6-766P-201ENST00000362478 107 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 RNU4-45P-201ENST00000365469 141 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 MIR590-201ENST00000385008 97 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 375.4 ms