Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.26□□□□□ -2.21
ZSWIM1Q9BR11 MIR5582-201ENST00000579697 68 ntBASIC1.26□□□□□ -2.21
ZSWIM1Q9BR11 MIR548Z-201ENST00000584743 97 ntBASIC1.26□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-90P-201ENST00000606352 106 ntBASIC1.26□□□□□ -2.21
ZSWIM1Q9BR11 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-1255P-201ENST00000363434 112 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-934P-201ENST00000365154 107 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 SNORD93-201ENST00000408813 74 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 SNORD83.1-201ENST00000411362 77 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 AC109327.2-201ENST00000448339 378 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-1194P-201ENST00000516208 104 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.705-201ENST00000516862 110 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 AC090897.1-201ENST00000580909 226 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 MALAT1.1-201ENST00000618249 95 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 AC023934.1-201ENST00000574529 2389 ntBASIC1.25□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-369P-201ENST00000362515 102 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.119-201ENST00000363301 96 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-1244P-201ENST00000363614 108 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 SNORA25-201ENST00000384384 134 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-644P-201ENST00000391155 98 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 RPS26P5-201ENST00000418544 335 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 RNU7-61P-201ENST00000515897 61 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
ZSWIM1Q9BR11 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-392P-201ENST00000364926 101 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-571P-201ENST00000384128 107 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.467-201ENST00000384297 102 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-813P-201ENST00000384691 107 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-972P-201ENST00000391208 107 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 RNY4P30-201ENST00000410216 95 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 MIR4771-2-201ENST00000577758 74 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 MIR4771-1-201ENST00000582617 74 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
ZSWIM1Q9BR11 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 RNU4-58P-201ENST00000363192 141 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.290-201ENST00000364879 114 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.567-201ENST00000384736 106 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 MIR1276-201ENST00000408707 83 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-887P-201ENST00000410660 100 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 SPINT5P-201ENST00000448174 155 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 SNORA25.16-201ENST00000516741 121 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 AC020891.4-201ENST00000605745 93 ntBASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ZSWIM1Q9BR11 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 Y_RNA.220-201ENST00000364244 109 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-1131P-201ENST00000364955 107 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-49P-201ENST00000384256 107 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 RNU4-83P-201ENST00000410863 133 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 MTND5P40-201ENST00000559945 246 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 MIR4500-201ENST00000579472 76 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 MIR6082-201ENST00000613604 109 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 MIR8066-201ENST00000617280 78 ntBASIC1.21□□□□□ -2.22
ZSWIM1Q9BR11 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 MIR4676-201ENST00000583078 72 ntBASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-86P-201ENST00000606534 107 ntBASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 U7.3-201ENST00000616123 62 ntBASIC1.2□□□□□ -2.22
ZSWIM1Q9BR11 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
ZSWIM1Q9BR11 MIR1827-201ENST00000408549 66 ntBASIC1.19□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-531P-201ENST00000516694 104 ntBASIC1.19□□□□□ -2.22
ZSWIM1Q9BR11 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
ZSWIM1Q9BR11 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-403P-201ENST00000363163 104 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 SNORD116-10-201ENST00000363791 102 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 AC015818.7-201ENST00000428754 109 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 AC087499.7-201ENST00000441958 109 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 RNA5SP480-201ENST00000516840 109 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-850P-201ENST00000516934 103 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-844P-201ENST00000517175 102 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 AC103810.7-201ENST00000607821 91 ntBASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-1125P-201ENST00000363601 107 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 SNORD58A-201ENST00000383875 65 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-480P-201ENST00000384332 107 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 SNORA72.6-201ENST00000384520 129 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 MIR938-201ENST00000401216 83 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.17□□□□□ -2.22
ZSWIM1Q9BR11 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 RNY1P7-201ENST00000384743 110 ntBASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 BX276092.1-201ENST00000427368 251 ntBASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 RNU7-156P-201ENST00000517214 74 ntBASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 AC006254.2-201ENST00000603259 279 ntBASIC1.16□□□□□ -2.22
ZSWIM1Q9BR11 RNU6-294P-201ENST00000364999 102 ntBASIC1.15□□□□□ -2.23
ZSWIM1Q9BR11 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
ZSWIM1Q9BR11 RNU7-56P-201ENST00000458744 62 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms