Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
VRK1Q99986 RNU6-448P-201ENST00000517052 107 ntBASIC1□□□□□ -2.25
VRK1Q99986 MIR4500-201ENST00000579472 76 ntBASIC1□□□□□ -2.25
VRK1Q99986 MIR6504-201ENST00000613520 61 ntBASIC1□□□□□ -2.25
VRK1Q99986 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
VRK1Q99986 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VRK1Q99986 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
VRK1Q99986 MIR577-201ENST00000385196 96 ntBASIC0.99□□□□□ -2.25
VRK1Q99986 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
VRK1Q99986 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
VRK1Q99986 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VRK1Q99986 Y_RNA.78-201ENST00000362970 110 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 RNU6-1099P-201ENST00000363533 107 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 SNORD100-201ENST00000408573 76 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
VRK1Q99986 Y_RNA.56-201ENST00000362798 112 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 RNU6-832P-201ENST00000363319 107 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 RNU6-106P-201ENST00000384405 107 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 MIR1302-5-201ENST00000408164 150 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 AC096720.1-201ENST00000604441 183 ntBASIC0.97□□□□□ -2.25
VRK1Q99986 MIR101-2-201ENST00000362195 79 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 Y_RNA.163-201ENST00000363702 113 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 RNU6-755P-201ENST00000364400 103 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 Y_RNA.536-201ENST00000384621 113 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 Y_RNA.697-201ENST00000516776 113 ntBASIC0.96□□□□□ -2.26
VRK1Q99986 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
VRK1Q99986 Y_RNA.10-201ENST00000362371 110 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 RNU6-571P-201ENST00000384128 107 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 AL035461.1-201ENST00000421490 332 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
VRK1Q99986 AC141557.1-201ENST00000540982 400 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 AL078603.1-201ENST00000603824 313 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 RNU7-10P-201ENST00000607194 63 ntBASIC0.95□□□□□ -2.26
VRK1Q99986 Y_RNA.174-201ENST00000363781 105 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 RNU4-36P-201ENST00000364294 144 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 SNORD114-22-201ENST00000365423 72 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 MIR548G-201ENST00000408442 89 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 SNRPGP12-201ENST00000449481 213 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 MIR548H5-201ENST00000580314 60 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 RNU6-90P-201ENST00000606352 106 ntBASIC0.94□□□□□ -2.26
VRK1Q99986 Y_RNA.247-201ENST00000364500 92 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 RNU6-1113P-201ENST00000384348 107 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 RNU6-291P-201ENST00000384720 107 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 RNU6-554P-201ENST00000410466 106 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 MTND5P40-201ENST00000559945 246 ntBASIC0.93□□□□□ -2.26
VRK1Q99986 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 RNA5SP117-201ENST00000365294 118 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 RNU6-535P-201ENST00000384722 107 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 Y_RNA.601-201ENST00000410500 113 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 BX276092.1-201ENST00000427368 251 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.92□□□□□ -2.26
VRK1Q99986 AC011195.1-201ENST00000578177 177 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 MIR6734-201ENST00000621166 68 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 uc_338.16-201ENST00000621804 95 ntBASIC0.92□□□□□ -2.26
VRK1Q99986 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.92□□□□□ -2.26
VRK1Q99986 Y_RNA.118-201ENST00000363300 101 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 Y_RNA.173-201ENST00000363776 113 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 MIR518E-201ENST00000385252 88 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 RNU6-904P-201ENST00000516206 101 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 MIR3612-201ENST00000579753 87 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 MIR4439-201ENST00000583746 80 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 uc_338.28-201ENST00000612082 187 ntBASIC0.91□□□□□ -2.26
VRK1Q99986 MIR635-201ENST00000384830 98 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 SPINT5P-201ENST00000448174 155 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.9□□□□□ -2.27
VRK1Q99986 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 RNA5SP220-201ENST00000516298 104 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 RNU6-850P-201ENST00000516934 103 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 MIR3613-201ENST00000579844 87 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
VRK1Q99986 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
VRK1Q99986 RNU6-170P-201ENST00000362832 104 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 SNORD45B-201ENST00000364617 72 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 Y_RNA.508-201ENST00000384502 114 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 AC138907.6-201ENST00000568401 126 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 AC138869.1-201ENST00000568623 124 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
VRK1Q99986 RNU6-766P-201ENST00000362478 107 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 Y_RNA.342-201ENST00000365352 113 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 Y_RNA.355-201ENST00000365462 98 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 RNU6-44P-201ENST00000384045 107 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 SNORA51.5-201ENST00000384126 131 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 RNU6-42P-201ENST00000384165 107 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 MIR519A1-201ENST00000385257 85 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 AL031737.1-201ENST00000450125 223 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 SNORA31.14-201ENST00000516728 116 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 RNU6-135P-201ENST00000516769 101 ntBASIC0.88□□□□□ -2.27
VRK1Q99986 RNU6-537P-201ENST00000517277 103 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms