Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNY4P20-201ENST00000516678 93 ntBASIC0.02□□□□□ -2.41
SSX3Q99909 RNU6-388P-201ENST00000517012 105 ntBASIC0.02□□□□□ -2.41
SSX3Q99909 RNU6-389P-201ENST00000517048 105 ntBASIC0.02□□□□□ -2.41
SSX3Q99909 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
SSX3Q99909 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU6-726P-201ENST00000364680 107 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 Y_RNA.272-201ENST00000364696 102 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 Y_RNA.362-201ENST00000365518 110 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 Y_RNA.441-201ENST00000384123 112 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU7-104P-201ENST00000459398 79 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU6-138P-201ENST00000515952 107 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU7-2P-201ENST00000516096 62 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 RNU7-161P-201ENST00000517289 62 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 MIR2909-201ENST00000617113 69 ntBASIC0.01□□□□□ -2.41
SSX3Q99909 Y_RNA.29-201ENST00000362570 113 ntBASIC0□□□□□ -2.41
SSX3Q99909 RNU4-11P-201ENST00000365287 132 ntBASIC0□□□□□ -2.41
SSX3Q99909 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
SSX3Q99909 MT-TG-201ENST00000387429 68 ntBASIC0□□□□□ -2.41
SSX3Q99909 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
SSX3Q99909 RPL39P34-201ENST00000477141 156 ntBASIC0□□□□□ -2.41
SSX3Q99909 AC067863.3-201ENST00000624172 122 ntBASIC0□□□□□ -2.41
SSX3Q99909 AP001362.1-201ENST00000625165 124 ntBASIC0□□□□□ -2.41
SSX3Q99909 RNU6-682P-201ENST00000363843 106 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 RNU6-865P-201ENST00000364772 107 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 MIR643-201ENST00000385267 97 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 AC108081.1-201ENST00000604358 221 ntBASIC-0.01□□□□□ -2.41
SSX3Q99909 RNU6-616P-201ENST00000384353 107 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 BX276092.1-201ENST00000427368 251 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 TRAJ51-201ENST00000504127 63 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 AL162376.1-201ENST00000624117 175 ntBASIC-0.02□□□□□ -2.41
SSX3Q99909 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 RNU6-151P-201ENST00000364158 107 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 SNORD115-35-201ENST00000365122 82 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 RNU6-449P-201ENST00000383914 107 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 MIR599-201ENST00000385069 95 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 SNORA81.3-201ENST00000517283 198 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 MIR499B-201ENST00000636498 73 ntBASIC-0.03□□□□□ -2.41
SSX3Q99909 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 MIR548I2-201ENST00000408348 149 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 AC097635.1-201ENST00000450678 155 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 RNU1-29P-201ENST00000606574 126 ntBASIC-0.04□□□□□ -2.42
SSX3Q99909 RNA5SP257-201ENST00000363023 116 ntBASIC-0.05□□□□□ -2.42
SSX3Q99909 AC004792.1-201ENST00000614523 137 ntBASIC-0.05□□□□□ -2.42
SSX3Q99909 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.05□□□□□ -2.42
SSX3Q99909 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 RNU6-915P-201ENST00000364943 103 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 RNU6-460P-201ENST00000391158 108 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 MIR513C-201ENST00000401352 84 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 AC074198.2-201ENST00000508153 258 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 RNU7-6P-201ENST00000516845 62 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 MIR3121-201ENST00000579680 77 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 U7.6-201ENST00000610841 64 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 MIR376B-201ENST00000614515 100 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 AC073869.9-201ENST00000641610 120 ntBASIC-0.06□□□□□ -2.42
SSX3Q99909 RNU6-652P-201ENST00000365488 107 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 MIR593-201ENST00000384856 100 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 SNORD41.1-201ENST00000391000 69 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 RNU7-197P-201ENST00000458836 62 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 SNORA70.25-201ENST00000612741 95 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
SSX3Q99909 RNU6-170P-201ENST00000362832 104 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 RNU6-269P-201ENST00000391077 97 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 RNU6-782P-201ENST00000516852 104 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 MIR3163-201ENST00000581592 73 ntBASIC-0.08□□□□□ -2.42
SSX3Q99909 SNORD116-18-201ENST00000383961 92 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 MIR759-201ENST00000390224 91 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SSX3Q99909 SNORD63B-201ENST00000411005 70 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 MIR4743-201ENST00000584576 69 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 AC087741.2-201ENST00000619415 172 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 AC021753.1-201ENST00000635724 168 ntBASIC-0.09□□□□□ -2.42
SSX3Q99909 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.1□□□□□ -2.43
SSX3Q99909 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.1□□□□□ -2.43
SSX3Q99909 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.1□□□□□ -2.43
SSX3Q99909 RNU6-571P-201ENST00000384128 107 ntBASIC-0.1□□□□□ -2.43
SSX3Q99909 MIR519A1-201ENST00000385257 85 ntBASIC-0.1□□□□□ -2.43
SSX3Q99909 MIR501-201ENST00000390204 84 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms