Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
HIST1H2AJQ99878 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 Y_RNA.173-201ENST00000363776 113 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 Y_RNA.567-201ENST00000384736 106 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 MIR520F-201ENST00000384824 87 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 SNORD92-201ENST00000585078 85 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 AC008608.1-201ENST00000603910 127 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
HIST1H2AJQ99878 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 SNRPGP12-201ENST00000449481 213 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
HIST1H2AJQ99878 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 RNU6-1244P-201ENST00000363614 108 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 RNY4P30-201ENST00000410216 95 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 RNU6-850P-201ENST00000516934 103 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 MIR4439-201ENST00000583746 80 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 MIR2052-201ENST00000636055 55 ntBASIC1.2□□□□□ -2.22
HIST1H2AJQ99878 MIR101-2-201ENST00000362195 79 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 MIR488-201ENST00000365739 83 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNU6-813P-201ENST00000384691 107 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNU1-119P-201ENST00000391122 165 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 BTF3P4-201ENST00000418852 495 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNU6-162P-201ENST00000516228 103 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNU6-765P-201ENST00000516916 99 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNA5SP170-201ENST00000517150 101 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 AC103810.7-201ENST00000607821 91 ntBASIC1.19□□□□□ -2.22
HIST1H2AJQ99878 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.342-201ENST00000365352 113 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 RNU6-571P-201ENST00000384128 107 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 MIR200A-201ENST00000384875 90 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 RNU6-1194P-201ENST00000516208 104 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.697-201ENST00000516776 113 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.705-201ENST00000516862 110 ntBASIC1.18□□□□□ -2.22
HIST1H2AJQ99878 MIR520H-201ENST00000385126 88 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 SNORD100-201ENST00000408573 76 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 U7.3-201ENST00000616123 62 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 MALAT1.1-201ENST00000618249 95 ntBASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.17□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.290-201ENST00000364879 114 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 MIR181B2-201ENST00000385004 89 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 RNU6-887P-201ENST00000410660 100 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.694-201ENST00000516677 117 ntBASIC1.16□□□□□ -2.22
HIST1H2AJQ99878 Y_RNA.57-201ENST00000362806 113 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 RNU6-1131P-201ENST00000364955 107 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 AL136317.1-201ENST00000612653 226 ntBASIC1.15□□□□□ -2.23
HIST1H2AJQ99878 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 Y_RNA.536-201ENST00000384621 113 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 RNU6-291P-201ENST00000384720 107 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 RNY1P7-201ENST00000384743 110 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 RNU6-972P-201ENST00000391208 107 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 MIR5582-201ENST00000579697 68 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 AC025521.1-201ENST00000621624 286 ntBASIC1.14□□□□□ -2.23
HIST1H2AJQ99878 Y_RNA.96-201ENST00000363092 109 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNU6-1125P-201ENST00000363601 107 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNU6-49P-201ENST00000384256 107 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNU6-480P-201ENST00000384332 107 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNU6-535P-201ENST00000384722 107 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 MIR516A2-201ENST00000384888 90 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 MIR516A1-201ENST00000385033 90 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 SNORD105-201ENST00000386910 85 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 TRAJ51-201ENST00000504127 63 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNA5SP458-201ENST00000516188 119 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 RNU6-448P-201ENST00000517052 107 ntBASIC1.13□□□□□ -2.23
HIST1H2AJQ99878 Y_RNA.56-201ENST00000362798 112 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 MIR635-201ENST00000384830 98 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 SNORD63B-201ENST00000411005 70 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 RNU7-106P-201ENST00000459514 67 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 AP003327.1-201ENST00000529684 127 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 AL513043.2-201ENST00000573941 143 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 MIR548H5-201ENST00000580314 60 ntBASIC1.12□□□□□ -2.23
HIST1H2AJQ99878 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 RNA5SP245-201ENST00000364239 121 ntBASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 SNORD58A-201ENST00000383875 65 ntBASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 AC092628.1-201ENST00000436250 252 ntBASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 MIR4769-201ENST00000584126 77 ntBASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
HIST1H2AJQ99878 Y_RNA.190-201ENST00000363964 101 ntBASIC1.1□□□□□ -2.23
HIST1H2AJQ99878 Y_RNA.220-201ENST00000364244 109 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms