Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 Y_RNA.662-201ENST00000516028 97 ntBASIC0.07□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 RNU6-726P-201ENST00000364680 107 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 RNU7-48P-201ENST00000458875 63 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 AL137067.1-201ENST00000615933 120 ntBASIC0.06□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.29-201ENST00000362570 113 ntBASIC0.05□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.98-201ENST00000363109 102 ntBASIC0.05□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.05□□□□□ -2.4
ZNF558Q96NG5 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
ZNF558Q96NG5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
ZNF558Q96NG5 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 MIR760-201ENST00000390220 80 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNY4P20-201ENST00000516678 93 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNU6-388P-201ENST00000517012 105 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNU6-389P-201ENST00000517048 105 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNU7-161P-201ENST00000517289 62 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNU1-29P-201ENST00000606574 126 ntBASIC0.04□□□□□ -2.4
ZNF558Q96NG5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.04□□□□□ -2.4
ZNF558Q96NG5 RNA5SP403-201ENST00000363598 108 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 RNA5SP128-201ENST00000365305 116 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 RNU6-449P-201ENST00000383914 107 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 Y_RNA.785-201ENST00000384290 109 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 RNU7-197P-201ENST00000458836 62 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 RNU7-2P-201ENST00000516096 62 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 AC108081.1-201ENST00000604358 221 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 AL162376.1-201ENST00000624117 175 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 AP001362.1-201ENST00000625165 124 ntBASIC0.03□□□□□ -2.4
ZNF558Q96NG5 RNU4-11P-201ENST00000365287 132 ntBASIC0.02□□□□□ -2.41
ZNF558Q96NG5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.02□□□□□ -2.41
ZNF558Q96NG5 MIR635-201ENST00000384830 98 ntBASIC0.02□□□□□ -2.41
ZNF558Q96NG5 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
ZNF558Q96NG5 MIR4500-201ENST00000579472 76 ntBASIC0.02□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.127-201ENST00000363386 109 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 RNU6-127P-201ENST00000390897 107 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 MIR548I2-201ENST00000408348 149 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 RNA5SP395-201ENST00000516567 118 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 SNORA81.3-201ENST00000517283 198 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 MIR4752-201ENST00000579672 72 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.328-201ENST00000365208 113 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 SNORD41.1-201ENST00000391000 69 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.580-201ENST00000391004 95 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 RNU6-1307P-201ENST00000391012 103 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 AC108059.2-201ENST00000434626 151 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 AC097635.1-201ENST00000450678 155 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 TRAJ51-201ENST00000504127 63 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 MIR3121-201ENST00000579680 77 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 AC004792.1-201ENST00000614523 137 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.778-201ENST00000620203 90 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
ZNF558Q96NG5 SNORD115-35-201ENST00000365122 82 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 RNU6-616P-201ENST00000384353 107 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 MIR519A1-201ENST00000385257 85 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 MIR548L-201ENST00000408303 86 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 RNU7-104P-201ENST00000459398 79 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 RPL39P34-201ENST00000477141 156 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 MIR5706-201ENST00000579841 80 ntBASIC-0.01□□□□□ -2.41
ZNF558Q96NG5 RNU7-129P-201ENST00000516128 62 ntBASIC-0.02□□□□□ -2.41
ZNF558Q96NG5 MIR4743-201ENST00000584576 69 ntBASIC-0.02□□□□□ -2.41
ZNF558Q96NG5 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
ZNF558Q96NG5 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 RNU6-151P-201ENST00000364158 107 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 RNU6-865P-201ENST00000364772 107 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 MIR599-201ENST00000385069 95 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
ZNF558Q96NG5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 RNU6-394P-201ENST00000410735 107 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 AC074198.2-201ENST00000508153 258 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 MIR376B-201ENST00000614515 100 ntBASIC-0.04□□□□□ -2.42
ZNF558Q96NG5 SNORD115-19-201ENST00000363098 82 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 SNORD115-18-201ENST00000363293 82 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 SNORD115-17-201ENST00000364612 82 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 RNU6-915P-201ENST00000364943 103 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 RNU6-35P-201ENST00000384530 107 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 RNU6-460P-201ENST00000391158 108 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 AL078595.1-201ENST00000404458 226 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 BX276092.1-201ENST00000427368 251 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 AC141557.1-201ENST00000540982 400 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 AC087741.2-201ENST00000619415 172 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 AC073869.9-201ENST00000641610 120 ntBASIC-0.05□□□□□ -2.42
ZNF558Q96NG5 RNU6-571P-201ENST00000384128 107 ntBASIC-0.06□□□□□ -2.42
ZNF558Q96NG5 IGKV1-22-201ENST00000524313 326 ntBASIC-0.06□□□□□ -2.42
ZNF558Q96NG5 U7.6-201ENST00000610841 64 ntBASIC-0.06□□□□□ -2.42
ZNF558Q96NG5 AP001340.1-201ENST00000624405 217 ntBASIC-0.06□□□□□ -2.42
ZNF558Q96NG5 MIR499B-201ENST00000636498 73 ntBASIC-0.06□□□□□ -2.42
ZNF558Q96NG5 RNU6-170P-201ENST00000362832 104 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms