Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 RNU4-83P-201ENST00000410863 133 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 AL161932.1-201ENST00000437408 146 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.685-201ENST00000516532 108 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 MIR7111-201ENST00000619751 72 ntBASIC1.56□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-633P-201ENST00000362612 103 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-509P-201ENST00000363519 107 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU7-171P-201ENST00000459581 62 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-850P-201ENST00000516934 103 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 MIR3202-2-201ENST00000635980 79 ntBASIC1.55□□□□□ -2.16
ZSWIM3Q96MP5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-1276P-201ENST00000365372 104 ntBASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 SNORD78.1-201ENST00000390866 65 ntBASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 AC048334.1-201ENST00000477975 159 ntBASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 MIR4500-201ENST00000579472 76 ntBASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 MIR4491-201ENST00000581087 68 ntBASIC1.54□□□□□ -2.16
ZSWIM3Q96MP5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 RNU1-36P-201ENST00000365130 165 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 SNORA75.2-201ENST00000391138 150 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 SNORA75.3-201ENST00000391231 150 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.609-201ENST00000410669 89 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 RNA5SP395-201ENST00000516567 118 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 MIR8066-201ENST00000617280 78 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 AC006160.2-201ENST00000637708 154 ntBASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.57-201ENST00000362806 113 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-242P-201ENST00000384359 107 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 AC087499.7-201ENST00000441958 109 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 SNORA31.2-201ENST00000516019 134 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 RN7SKP88-201ENST00000516847 250 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 AC036111.3-201ENST00000526389 112 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 7SK.8-201ENST00000612110 250 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 7SK.11-201ENST00000615477 250 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 7SK.13-201ENST00000622040 250 ntBASIC1.52□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-228P-201ENST00000362700 106 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-787P-201ENST00000384032 107 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 MIR1276-201ENST00000408707 83 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 BX276092.1-201ENST00000427368 251 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 snoU13.21-201ENST00000459368 105 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 MIR4666B-201ENST00000578142 81 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 MIR548BB-201ENST00000626714 66 ntBASIC1.51□□□□□ -2.17
ZSWIM3Q96MP5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 RNU4-58P-201ENST00000363192 141 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 SNORD113.3-201ENST00000364630 78 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-53P-201ENST00000365367 106 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 RNU7-185P-201ENST00000459215 60 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-638P-201ENST00000516582 104 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-531P-201ENST00000516694 104 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 SNORA25.16-201ENST00000516741 121 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 AC106800.4-201ENST00000614905 153 ntBASIC1.5□□□□□ -2.17
ZSWIM3Q96MP5 SNORD115-27-201ENST00000364430 82 ntBASIC1.49□□□□□ -2.17
ZSWIM3Q96MP5 SNORD93-201ENST00000408813 74 ntBASIC1.49□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.648-201ENST00000459455 110 ntBASIC1.49□□□□□ -2.17
ZSWIM3Q96MP5 AL353770.2-201ENST00000620024 78 ntBASIC1.49□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.426-201ENST00000384068 113 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-1124P-201ENST00000384169 107 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.607-201ENST00000410597 98 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 RNU7-85P-201ENST00000458851 63 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 RNU7-21P-201ENST00000459430 62 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 RNU6-765P-201ENST00000516916 99 ntBASIC1.48□□□□□ -2.17
ZSWIM3Q96MP5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 SNORD36A-201ENST00000362874 73 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 MIR519A1-201ENST00000385257 85 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 SNORD111-201ENST00000408139 94 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 MIR1257-201ENST00000408490 117 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 SNORD4B-201ENST00000459083 72 ntBASIC1.47□□□□□ -2.17
ZSWIM3Q96MP5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-519P-201ENST00000410590 108 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.611-201ENST00000410682 108 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 SNORD83.1-201ENST00000411362 77 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 AL591704.2-201ENST00000421658 181 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 SNORD79.1-201ENST00000516069 84 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 MIR6082-201ENST00000613604 109 ntBASIC1.46□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 SNORA80D-201ENST00000384488 135 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms