Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR34C-201ENST00000384831 77 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 SNORD105-201ENST00000386910 85 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 RNU6-531P-201ENST00000516694 104 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 SNORA25.16-201ENST00000516741 121 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 AC141557.1-201ENST00000540982 400 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 MTND5P40-201ENST00000559945 246 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 AL442128.1-201ENST00000615151 90 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 RMST_2.1-201ENST00000617263 136 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 MIR101-2-201ENST00000362195 79 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 RNY3P2-201ENST00000362918 102 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 SNORD38.1-201ENST00000363863 68 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 RNU6-44P-201ENST00000384045 107 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 PDCD5P2-201ENST00000507570 312 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CTHRC1Q96CG8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.78-201ENST00000362970 110 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNU6-1099P-201ENST00000363533 107 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.377-201ENST00000365644 108 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNU6-106P-201ENST00000384405 107 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 MIR577-201ENST00000385196 96 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNA5SP480-201ENST00000516840 109 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNU6-90P-201ENST00000606352 106 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 MIR8066-201ENST00000617280 78 ntBASIC0.96□□□□□ -2.26
CTHRC1Q96CG8 RNU6-832P-201ENST00000363319 107 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 RNU6-755P-201ENST00000364400 103 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 MIR520H-201ENST00000385126 88 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 AL353813.1-201ENST00000440700 253 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 AL031737.1-201ENST00000450125 223 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 AC090897.1-201ENST00000580909 226 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.95□□□□□ -2.26
CTHRC1Q96CG8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 SNORA51.5-201ENST00000384126 131 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 SPINT5P-201ENST00000448174 155 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 AP003327.1-201ENST00000529684 127 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 RNU7-10P-201ENST00000607194 63 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 uc_338.28-201ENST00000612082 187 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
CTHRC1Q96CG8 RNU6-756P-201ENST00000383997 107 ntBASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 RNU6-554P-201ENST00000410466 106 ntBASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.93□□□□□ -2.26
CTHRC1Q96CG8 HSBP1P2-201ENST00000299671 229 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 SNORA63.4-201ENST00000362763 126 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 MIR548G-201ENST00000408442 89 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 MIR548H5-201ENST00000580314 60 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 AC008608.1-201ENST00000603910 127 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 MIR6515-201ENST00000619843 57 ntBASIC0.92□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.91□□□□□ -2.26
CTHRC1Q96CG8 Y_RNA.81-201ENST00000362997 102 ntBASIC0.91□□□□□ -2.26
CTHRC1Q96CG8 SNORD45B-201ENST00000364617 72 ntBASIC0.91□□□□□ -2.26
CTHRC1Q96CG8 RNA5SP117-201ENST00000365294 118 ntBASIC0.91□□□□□ -2.26
CTHRC1Q96CG8 RNU6-766P-201ENST00000362478 107 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 SNORD114-26-201ENST00000363543 72 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 RNU6-571P-201ENST00000384128 107 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 MIR635-201ENST00000384830 98 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 BX276092.1-201ENST00000427368 251 ntBASIC0.9□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 RNU6-535P-201ENST00000384722 107 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 SCARNA23-201ENST00000516060 130 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 RNU6-904P-201ENST00000516206 101 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 MIR4439-201ENST00000583746 80 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.88□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.88□□□□□ -2.27
CTHRC1Q96CG8 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
CTHRC1Q96CG8 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.544-201ENST00000384650 113 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms