Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 RNU6-588P-201ENST00000410281 105 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 ELOCP20-201ENST00000422460 345 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 MIR1270-201ENST00000459320 83 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 NBR2-204ENST00000587322 63 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 AL162413.1-201ENST00000603198 110 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 PART1_1.1-201ENST00000611761 217 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 AC107308.1-201ENST00000615897 301 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 RNU6-831P-201ENST00000384548 107 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 MIR514A2-201ENST00000385131 88 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 MIR514A3-201ENST00000385132 88 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 SNORA69.1-201ENST00000390904 137 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 RNU6-893P-201ENST00000458841 100 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 RN7SKP295-201ENST00000517264 153 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 AC021443.1-201ENST00000604478 211 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 AL021707.8-201ENST00000609428 183 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 AC124864.2-201ENST00000624736 186 ntBASIC-0.73□□□□□ -2.53
TTC28Q96AY4 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU1-115P-201ENST00000365329 160 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 MT-TT-201ENST00000387460 66 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU6-373P-201ENST00000411247 98 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
TTC28Q96AY4 AL512360.1-201ENST00000555346 234 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 MIR4662B-201ENST00000579498 81 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 AC084782.3-201ENST00000612282 578 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 AC024614.3-201ENST00000637860 256 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 SNORD114-10-201ENST00000363409 72 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 MIR539-201ENST00000365690 78 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU6-841P-201ENST00000383872 107 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU6-484P-201ENST00000384016 107 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 MIR519E-201ENST00000385075 84 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 SNORD78.2-201ENST00000391076 69 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 RNU6-273P-201ENST00000516937 96 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 AC120024.2-201ENST00000576526 175 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 MIR4460-201ENST00000577862 86 ntBASIC-0.74□□□□□ -2.53
TTC28Q96AY4 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 MTND1P34-201ENST00000438556 671 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU6-126P-201ENST00000516685 103 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU7-35P-201ENST00000517174 62 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 MIR4724-201ENST00000579485 89 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 MIR4659A-201ENST00000580269 81 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AC145423.2-201ENST00000610631 239 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 snoR1.1-201ENST00000628177 80 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 MIR494-201ENST00000349529 81 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU6-106P-201ENST00000384405 107 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.75□□□□□ -2.53
TTC28Q96AY4 SEPT14P3-201ENST00000439401 183 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AL732372.2-207ENST00000445840 183 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 SEPT14P2-201ENST00000453405 183 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU2-31P-201ENST00000516954 155 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 FO082796.1-201ENST00000523795 183 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AP002795.1-201ENST00000534879 84 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 MIR3145-201ENST00000580727 82 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 AL008718.3-201ENST00000610217 321 ntBASIC-0.75□□□□□ -2.53
TTC28Q96AY4 RNU6-238P-201ENST00000363313 106 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 SNORD113-3-201ENST00000364830 72 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-144P-201ENST00000383951 107 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 SNORA51.5-201ENST00000384126 131 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 MIR599-201ENST00000385069 95 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 AC024067.1-201ENST00000426199 223 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 AC097635.1-201ENST00000450678 155 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU7-113P-201ENST00000459273 62 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-719P-201ENST00000516671 104 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.76□□□□□ -2.53
TTC28Q96AY4 MIR4500-201ENST00000579472 76 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 Z69908.1-201ENST00000622603 247 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 SNORD63-201ENST00000384262 68 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
TTC28Q96AY4 MTND1P2-201ENST00000430604 821 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 MTND3P12-201ENST00000559068 328 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 MIR4464-201ENST00000580818 92 ntBASIC-0.76□□□□□ -2.53
TTC28Q96AY4 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU4-85P-201ENST00000364675 123 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU6-763P-201ENST00000390865 106 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU6-530P-201ENST00000391180 107 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.77□□□□□ -2.53
TTC28Q96AY4 SNORD67.1-201ENST00000516618 108 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 RNU6-365P-201ENST00000517113 106 ntBASIC-0.77□□□□□ -2.53
TTC28Q96AY4 MIR5701-3-201ENST00000578890 82 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms