Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNA5SP325-201ENST00000363756 130 ntBASIC0.87□□□□□ -2.27
HPS3Q969F9 AL670379.3-201ENST00000605040 251 ntBASIC0.87□□□□□ -2.27
HPS3Q969F9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 RNU4-67P-201ENST00000364569 141 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 RNU4-61P-201ENST00000411243 107 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 RPL39P34-201ENST00000477141 156 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 AC007012.1-201ENST00000567192 175 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 MIR4679-2-201ENST00000578358 77 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 MIR1255B1-201ENST00000636325 63 ntBASIC0.86□□□□□ -2.27
HPS3Q969F9 RNU6-363P-201ENST00000362895 105 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 RNU6-535P-201ENST00000384722 107 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 SNORD33.1-201ENST00000516213 88 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 RNU6-469P-201ENST00000516253 101 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 MIR4500-201ENST00000579472 76 ntBASIC0.85□□□□□ -2.27
HPS3Q969F9 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 Y_RNA.155-201ENST00000363632 101 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 RNU6-22P-201ENST00000384355 107 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 SNORD38.2-201ENST00000384470 69 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 Y_RNA.563-201ENST00000384707 108 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 MIR1912-201ENST00000410389 80 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 SNORA7.5-201ENST00000410672 110 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 AL365222.1-201ENST00000614661 98 ntBASIC0.84□□□□□ -2.27
HPS3Q969F9 Y_RNA.261-201ENST00000364631 102 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 RNU6-409P-201ENST00000384114 104 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 MIR548A1-201ENST00000385041 97 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 RNA5SP436-201ENST00000516020 115 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 MTND5P34-201ENST00000568888 325 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 RNU7-10P-201ENST00000607194 63 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 MIR376B-201ENST00000614515 100 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 AL162726.3-218ENST00000636401 95 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 AL512310.12-203ENST00000640543 90 ntBASIC0.83□□□□□ -2.28
HPS3Q969F9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 Y_RNA.309-201ENST00000365046 111 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 RNU6-816P-201ENST00000390914 107 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 RNU6-1268P-201ENST00000391214 107 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 RNU6-1239P-201ENST00000391310 107 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 MIR548H5-201ENST00000580314 60 ntBASIC0.82□□□□□ -2.28
HPS3Q969F9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.82□□□□□ -2.28
HPS3Q969F9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-291P-201ENST00000384720 107 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-1168P-201ENST00000390831 104 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-313P-201ENST00000516317 112 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-479P-201ENST00000516348 105 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-135P-201ENST00000516769 101 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
HPS3Q969F9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
HPS3Q969F9 RNU6-1154P-201ENST00000391001 104 ntBASIC0.8□□□□□ -2.28
HPS3Q969F9 RNU6-733P-201ENST00000410759 104 ntBASIC0.8□□□□□ -2.28
HPS3Q969F9 RNU6-1018P-201ENST00000516577 106 ntBASIC0.8□□□□□ -2.28
HPS3Q969F9 SNORA63.5-201ENST00000363548 123 ntBASIC0.79□□□□□ -2.28
HPS3Q969F9 MIR34C-201ENST00000384831 77 ntBASIC0.79□□□□□ -2.28
HPS3Q969F9 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
HPS3Q969F9 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
HPS3Q969F9 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
HPS3Q969F9 SNORD113-1-201ENST00000365321 69 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 AL606753.1-201ENST00000427435 87 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 RNU6-412P-201ENST00000516434 106 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 SNORA31.14-201ENST00000516728 116 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
HPS3Q969F9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 RNU6-1313P-201ENST00000362622 102 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 Y_RNA.49-201ENST00000362714 112 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 RNA5SP205-201ENST00000364653 136 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 SNORD116-21-201ENST00000384507 92 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 RNU6-880P-201ENST00000384526 107 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 MIR635-201ENST00000384830 98 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 MIR193B-201ENST00000384907 83 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 MIR548I2-201ENST00000408348 149 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 RNU6-406P-201ENST00000516470 107 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
HPS3Q969F9 RNU6-679P-201ENST00000391003 106 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.76□□□□□ -2.29
HPS3Q969F9 MTND5P40-201ENST00000559945 246 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 AC138869.1-201ENST00000568623 124 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 AL035470.1-201ENST00000622571 220 ntBASIC0.76□□□□□ -2.29
HPS3Q969F9 MIR644A-201ENST00000385262 94 ntBASIC0.75□□□□□ -2.29
HPS3Q969F9 RNU2-51P-201ENST00000410708 197 ntBASIC0.75□□□□□ -2.29
HPS3Q969F9 BX276092.1-201ENST00000427368 251 ntBASIC0.75□□□□□ -2.29
HPS3Q969F9 RNU6-834P-201ENST00000362367 110 ntBASIC0.74□□□□□ -2.29
HPS3Q969F9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.74□□□□□ -2.29
HPS3Q969F9 RNU6-571P-201ENST00000384128 107 ntBASIC0.74□□□□□ -2.29
HPS3Q969F9 Y_RNA.549-201ENST00000384657 102 ntBASIC0.74□□□□□ -2.29
HPS3Q969F9 RNU6-476P-201ENST00000384726 107 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms