Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SNORD38B-202ENST00000625943 69 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 MIR4251-201ENST00000635819 61 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 MIR653-201ENST00000385279 96 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 MIR1304-201ENST00000408243 91 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 MIR1302-7-201ENST00000408841 72 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-539P-201ENST00000516665 103 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SH3RF3Q8TEJ3 MIR563-201ENST00000385080 79 ntBASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 RNA5SP292-201ENST00000390974 118 ntBASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-850P-201ENST00000516934 103 ntBASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 AC133485.1-201ENST00000567176 124 ntBASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-686P-201ENST00000364839 107 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 Y_RNA.386-201ENST00000383913 105 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-360P-201ENST00000390944 104 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 MIR1265-201ENST00000408444 86 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 snoU13.2-201ENST00000459201 104 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-1015P-201ENST00000517121 99 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
SH3RF3Q8TEJ3 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 snoU13.11-201ENST00000459219 104 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-75P-201ENST00000515944 104 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 MIR4796-201ENST00000580742 81 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 AP000753.3-201ENST00000604083 169 ntBASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 SNORD36A-201ENST00000362874 73 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-161P-201ENST00000363051 106 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-132P-201ENST00000383863 107 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 RNA5SP237-201ENST00000410414 113 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 AL161935.2-201ENST00000414627 60 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 BX276092.1-201ENST00000427368 251 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR3192-201ENST00000584920 77 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR6740-201ENST00000618268 113 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 AC008163.1-202ENST00000636004 2889 ntBASIC1.73□□□□□ -2.13
SH3RF3Q8TEJ3 MIR30D-201ENST00000362283 70 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-571P-201ENST00000384128 107 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 SNORD41-201ENST00000386967 70 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 SNORD90-201ENST00000391145 111 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 snoU13.25-201ENST00000458945 104 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 RNU6-687P-201ENST00000516443 89 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 U6.109-201ENST00000636749 87 ntBASIC1.72□□□□□ -2.13
SH3RF3Q8TEJ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-411P-201ENST00000384451 107 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 MIR588-201ENST00000384900 83 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 RNA5SP480-201ENST00000516840 109 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 uc_338.6-201ENST00000613544 171 ntBASIC1.71□□□□□ -2.14
SH3RF3Q8TEJ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
SH3RF3Q8TEJ3 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
SH3RF3Q8TEJ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.7□□□□□ -2.14
SH3RF3Q8TEJ3 SNORA18.5-201ENST00000516616 101 ntBASIC1.7□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-811P-201ENST00000384069 107 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 MIR635-201ENST00000384830 98 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 MIR516A2-201ENST00000384888 90 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 MIR516A1-201ENST00000385033 90 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 RNU7-106P-201ENST00000459514 67 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 AC023790.1-201ENST00000482174 347 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 FGF7P7-201ENST00000514120 227 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 MIR3064-201ENST00000581130 66 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 AL096861.1-201ENST00000610899 123 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 MIR664A-201ENST00000626086 82 ntBASIC1.69□□□□□ -2.14
SH3RF3Q8TEJ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 SNORD33-201ENST00000362761 85 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 AC074348.1-201ENST00000426503 132 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-448P-201ENST00000517052 107 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 MIR4484-201ENST00000582855 83 ntBASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
SH3RF3Q8TEJ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 SNORA72.6-201ENST00000384520 129 ntBASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 RNU6-634P-201ENST00000459134 106 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 274.7 ms