Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 MIR4643-201ENST00000577473 78 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 YWHAEP2-201ENST00000580066 112 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 uc_338.36-201ENST00000622331 158 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 SNORA51.5-201ENST00000384126 131 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 RNA5SP451-201ENST00000410588 110 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 MIR3681-201ENST00000580089 72 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 MIR4280-201ENST00000582178 76 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 AC009779.6-201ENST00000603972 165 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 MIR376B-201ENST00000614515 100 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 AL160413.1-201ENST00000622780 310 ntBASIC-0.46□□□□□ -2.48
LMX1AQ8TE12 SNORA25.7-201ENST00000364375 127 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 MIR582-201ENST00000365731 98 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 AL445193.1-201ENST00000441183 141 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 RNY3P16-201ENST00000516338 101 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 RNU7-13P-201ENST00000516413 62 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 SNORD38.3-201ENST00000516599 73 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 AC011603.4-201ENST00000611325 277 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 AC069503.3-201ENST00000618674 145 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 U6.100-201ENST00000636230 99 ntBASIC-0.47□□□□□ -2.48
LMX1AQ8TE12 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 RNU6-154P-201ENST00000384306 106 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 SNORA32.3-201ENST00000384772 121 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 RNU6-985P-201ENST00000410182 104 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 MIR2113-201ENST00000459007 91 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 RNU7-123P-201ENST00000515911 60 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.48□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNU6-643P-201ENST00000384018 107 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR34C-201ENST00000384831 77 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR516A2-201ENST00000384888 90 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR516A1-201ENST00000385033 90 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MT-TI-201ENST00000387365 69 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR548P-201ENST00000408336 84 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 AC022028.1-201ENST00000412054 408 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNU7-48P-201ENST00000458875 63 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNU7-74P-201ENST00000459104 62 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 AC074198.2-201ENST00000508153 258 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNU6-240P-201ENST00000516098 97 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNA5SP66-201ENST00000517178 101 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR5704-201ENST00000584029 77 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR4263-201ENST00000584745 83 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 MIR8068-201ENST00000618032 68 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 AC087741.2-201ENST00000619415 172 ntBASIC-0.49□□□□□ -2.49
LMX1AQ8TE12 RNU6-170P-201ENST00000362832 104 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 SNORD115-44-201ENST00000365391 82 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU6-616P-201ENST00000384353 107 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 MIR617-201ENST00000385030 97 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 MIR652-201ENST00000385278 98 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU6-721P-201ENST00000410155 105 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU4-69P-201ENST00000410677 143 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU6-287P-201ENST00000516230 98 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 AP000676.1-201ENST00000533307 52 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 AC020661.2-201ENST00000560114 134 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 AC007012.1-201ENST00000567192 175 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 RNU2-4P-201ENST00000606190 192 ntBASIC-0.5□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 SNORD95.1-201ENST00000364099 68 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 RNU4-84P-201ENST00000364200 139 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 RNU6-30P-201ENST00000384561 107 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 MT-TY-201ENST00000387409 66 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 RNU6-850P-201ENST00000516934 103 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 MIR4801-201ENST00000582704 82 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 MIR3171-201ENST00000584270 74 ntBASIC-0.51□□□□□ -2.49
LMX1AQ8TE12 SNORD114-14-201ENST00000362723 75 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 RNU6-690P-201ENST00000365242 106 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 MIR224-201ENST00000384889 81 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms