Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNU7-102P-201ENST00000458948 62 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 AC090897.1-201ENST00000580909 226 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.10-201ENST00000362371 110 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 RNU4-36P-201ENST00000364294 144 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 RNU6-756P-201ENST00000383997 107 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 SNORD38.2-201ENST00000384470 69 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 SNORA72.6-201ENST00000384520 129 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 RNU1-119P-201ENST00000391122 165 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.601-201ENST00000410500 113 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 SNORA19.1-201ENST00000410656 129 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 DEFB131E-201ENST00000532329 154 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 MIR4500-201ENST00000579472 76 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 AC008608.1-201ENST00000603910 127 ntBASIC1.1□□□□□ -2.23
CCHCR1Q8TD31 RNU6-153P-201ENST00000364422 104 ntBASIC1.09□□□□□ -2.23
CCHCR1Q8TD31 RNU6-147P-201ENST00000383983 107 ntBASIC1.09□□□□□ -2.23
CCHCR1Q8TD31 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
CCHCR1Q8TD31 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
CCHCR1Q8TD31 AC096720.1-201ENST00000604441 183 ntBASIC1.09□□□□□ -2.23
CCHCR1Q8TD31 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 MIR590-201ENST00000385008 97 ntBASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 SNORD105-201ENST00000386910 85 ntBASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 AP003327.1-201ENST00000529684 127 ntBASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 AC013244.2-201ENST00000603396 103 ntBASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.08□□□□□ -2.24
CCHCR1Q8TD31 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 MIR450A1-201ENST00000362262 91 ntBASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 MIR548G-201ENST00000408442 89 ntBASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 SNRPGP12-201ENST00000449481 213 ntBASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.173-201ENST00000363776 113 ntBASIC1.06□□□□□ -2.24
CCHCR1Q8TD31 RNU6-1335P-201ENST00000365426 107 ntBASIC1.06□□□□□ -2.24
CCHCR1Q8TD31 MIR4439-201ENST00000583746 80 ntBASIC1.06□□□□□ -2.24
CCHCR1Q8TD31 RNU6-90P-201ENST00000606352 106 ntBASIC1.06□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.818-201ENST00000618813 71 ntBASIC1.06□□□□□ -2.24
CCHCR1Q8TD31 SNORD45B-201ENST00000364617 72 ntBASIC1.05□□□□□ -2.24
CCHCR1Q8TD31 RNU6-571P-201ENST00000384128 107 ntBASIC1.05□□□□□ -2.24
CCHCR1Q8TD31 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
CCHCR1Q8TD31 SCARNA23-201ENST00000516060 130 ntBASIC1.05□□□□□ -2.24
CCHCR1Q8TD31 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.56-201ENST00000362798 112 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 RNU6-1163P-201ENST00000364516 107 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.544-201ENST00000384650 113 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 BX276092.1-201ENST00000427368 251 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 RNU6-448P-201ENST00000517052 107 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 MTND5P40-201ENST00000559945 246 ntBASIC1.04□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.95-201ENST00000363079 95 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.536-201ENST00000384621 113 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 SNORD100-201ENST00000408573 76 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 SPINT5P-201ENST00000448174 155 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.659-201ENST00000515994 113 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 Y_RNA.697-201ENST00000516776 113 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 AC091304.10-201ENST00000641554 121 ntBASIC1.03□□□□□ -2.24
CCHCR1Q8TD31 MIR101-2-201ENST00000362195 79 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 RNU6-170P-201ENST00000362832 104 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 AC004941.2-201ENST00000427009 228 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 RNU6-850P-201ENST00000516934 103 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 RNU6-158P-201ENST00000517104 100 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 AC012531.4-201ENST00000616509 177 ntBASIC1.02□□□□□ -2.25
CCHCR1Q8TD31 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-32P-201ENST00000383948 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-13P-201ENST00000384248 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-12P-201ENST00000384604 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-291P-201ENST00000384720 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.567-201ENST00000384736 106 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-41P-201ENST00000384741 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 AC109327.2-201ENST00000448339 378 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-109P-201ENST00000516364 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 RNU6-184P-201ENST00000516514 107 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 MIR548H5-201ENST00000580314 60 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 MIR4777-201ENST00000583710 86 ntBASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.01□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.93-201ENST00000363066 109 ntBASIC1□□□□□ -2.25
CCHCR1Q8TD31 AC002350.1-201ENST00000490759 375 ntBASIC1□□□□□ -2.25
CCHCR1Q8TD31 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
CCHCR1Q8TD31 AP001318.4-201ENST00000616637 121 ntBASIC1□□□□□ -2.25
CCHCR1Q8TD31 uc_338.16-201ENST00000621804 95 ntBASIC1□□□□□ -2.25
CCHCR1Q8TD31 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.495-201ENST00000384435 112 ntBASIC0.99□□□□□ -2.25
CCHCR1Q8TD31 RNU6-535P-201ENST00000384722 107 ntBASIC0.99□□□□□ -2.25
CCHCR1Q8TD31 RNU6-795P-201ENST00000516323 103 ntBASIC0.99□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.4-201ENST00000362333 112 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.107-201ENST00000363190 121 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 Y_RNA.342-201ENST00000365352 113 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 MIR635-201ENST00000384830 98 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 MIR519A1-201ENST00000385257 85 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 MIR548Z-201ENST00000584743 97 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
CCHCR1Q8TD31 RNU6-86P-201ENST00000606534 107 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 258.4 ms