Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU6-408P-201ENST00000515910 100 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU7-4P-201ENST00000516961 62 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RN7SKP295-201ENST00000517264 153 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 AC097639.2-201ENST00000603159 172 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU6-194P-201ENST00000363862 105 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU6-510P-201ENST00000391239 108 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 CCDC34P1-201ENST00000507441 517 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 MTCO2P24-201ENST00000515611 426 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU6-191P-201ENST00000516295 94 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 MTND3P12-201ENST00000559068 328 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 AP001542.1-201ENST00000591314 200 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 TRDV1-202ENST00000621643 102 ntBASIC-1.16□□□□□ -2.6
ALMS1Q8TCU4 RNU6-647P-201ENST00000364243 107 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC009161.1-201ENST00000417306 376 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 RNA5SP147-201ENST00000516493 109 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC037487.3-201ENST00000606668 112 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AL593851.1-201ENST00000426171 157 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 SCARNA15-202ENST00000516881 127 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC138907.4-201ENST00000570107 226 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 MIR4748-201ENST00000578076 82 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC018645.2-201ENST00000609151 472 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC073114.1-201ENST00000612027 490 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 MIR6128-201ENST00000615528 109 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 MIR526A2-201ENST00000390198 65 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 RNU7-2P-201ENST00000516096 62 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 AC021443.1-201ENST00000604478 211 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 Z69908.1-201ENST00000622603 247 ntBASIC-1.17□□□□□ -2.6
ALMS1Q8TCU4 FGF7P2-201ENST00000332473 296 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU4-17P-201ENST00000365598 141 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MIR451A-201ENST00000385059 72 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MIR1270-201ENST00000459320 83 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU2-4P-201ENST00000606190 192 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 SNORD116-11-201ENST00000383882 92 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-383P-201ENST00000410864 94 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNA5SP401-201ENST00000515920 127 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 AP002795.1-201ENST00000534879 84 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 C8orf59P2-201ENST00000603441 271 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 SNORA63.2-201ENST00000362603 126 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-80P-201ENST00000384195 107 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-21P-201ENST00000384710 107 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MIR521-2-201ENST00000384818 87 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-764P-201ENST00000516396 105 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 AC005899.2-201ENST00000584353 90 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 AC013791.1-201ENST00000616619 62 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 AP000720.1-201ENST00000625091 483 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 ELOCP20-201ENST00000422460 345 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 SNRPGP8-201ENST00000454064 226 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 RNU6-720P-201ENST00000516363 108 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MIR4536-1-201ENST00000583537 88 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 DEFB117-201ENST00000602356 141 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 AC090617.8-201ENST00000623339 167 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MIR3662-201ENST00000637030 95 ntBASIC-1.18□□□□□ -2.6
ALMS1Q8TCU4 MT-TH-201ENST00000387441 69 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 SNORA79-201ENST00000408376 140 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RBMX2P4-201ENST00000441256 376 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RPS29P25-201ENST00000481709 171 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-864P-201ENST00000516256 108 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-751P-201ENST00000516382 101 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-256P-201ENST00000516747 97 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-453P-201ENST00000516819 85 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 RNU6-273P-201ENST00000516937 96 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 AP002392.1-201ENST00000537692 208 ntBASIC-1.19□□□□□ -2.6
ALMS1Q8TCU4 SNORD115-19-201ENST00000363098 82 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 SNORD115-18-201ENST00000363293 82 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 SNORD115-17-201ENST00000364612 82 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MT-TT-201ENST00000387460 66 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 AC107399.1-201ENST00000451226 265 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MIR4509-3-201ENST00000578671 94 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MIR4509-2-201ENST00000583920 94 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 SNORD113-5-201ENST00000607261 78 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MIR4509-1-201ENST00000618224 94 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms