Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR377-201ENST00000362145 69 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNU6-654P-201ENST00000364373 107 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNU6-1177P-201ENST00000391058 104 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNU6-274P-201ENST00000459566 107 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNA5SP320-201ENST00000516263 124 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNU6-548P-201ENST00000517083 115 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 Y_RNA.13-201ENST00000362403 112 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 RNU6-382P-201ENST00000365181 106 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 AL161935.2-201ENST00000414627 60 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 AL691482.2-201ENST00000457453 84 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 RNU6-982P-201ENST00000516216 102 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 RNU6-947P-201ENST00000516264 106 ntBASIC2.45□□□□□ -2.02
SNIP1Q8TAD8 Y_RNA.258-201ENST00000364613 105 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 RNU6-580P-201ENST00000365159 107 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 MIR1185-1-201ENST00000408598 86 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 AC097635.1-201ENST00000450678 155 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 RNU6-752P-201ENST00000516376 102 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 SNRPGP19-201ENST00000603826 189 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 MIR6082-201ENST00000613604 109 ntBASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNIP1Q8TAD8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 MIR599-201ENST00000385069 95 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 RNA5SP450-201ENST00000411206 102 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 AC244098.3-201ENST00000424803 96 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 RNU7-185P-201ENST00000459215 60 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 MIR514B-201ENST00000516774 80 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 AP003716.2-201ENST00000528260 108 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 MIR1273D-201ENST00000577266 86 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 MIR3605-201ENST00000583214 100 ntBASIC2.43□□□□□ -2.02
SNIP1Q8TAD8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNIP1Q8TAD8 MIR4635-201ENST00000583759 79 ntBASIC2.42□□□□□ -2.02
SNIP1Q8TAD8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.42□□□□□ -2.02
SNIP1Q8TAD8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 RNU6-1079P-201ENST00000362861 110 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 RNA5SP247-201ENST00000411181 105 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 AL133373.1-201ENST00000497098 94 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 RNU6-1265P-201ENST00000516342 103 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 AC092634.7-201ENST00000621022 103 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SNIP1Q8TAD8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 SNORD114-1-201ENST00000362705 72 ntBASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 RPS29P6-201ENST00000438196 145 ntBASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
SNIP1Q8TAD8 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 MIR103A2-201ENST00000362154 78 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 JTBP1-201ENST00000441314 247 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 snoU13.21-201ENST00000459368 105 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 RNA5SP458-201ENST00000516188 119 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 RNU6-1057P-201ENST00000517162 102 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 AC138907.6-201ENST00000568401 126 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 AC138869.1-201ENST00000568623 124 ntBASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNIP1Q8TAD8 RNU6-668P-201ENST00000364180 107 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 U3.27-201ENST00000391237 200 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 MIR1257-201ENST00000408490 117 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 SUMO1P4-201ENST00000429430 302 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 RNU6-250P-201ENST00000516958 103 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 AC015688.6-201ENST00000577737 104 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 AL078603.1-201ENST00000603824 313 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNIP1Q8TAD8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 RNA5SP264-201ENST00000363115 107 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 RNA5SP99-201ENST00000364020 114 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 MTND4LP1-201ENST00000446263 157 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 RNU6-542P-201ENST00000516405 103 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 MIR466-201ENST00000580653 84 ntBASIC2.37□□□□□ -2.03
SNIP1Q8TAD8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 RNU6-287P-201ENST00000516230 98 ntBASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 RNU6-765P-201ENST00000516916 99 ntBASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNIP1Q8TAD8 SNORA25.5-201ENST00000363782 126 ntBASIC2.35□□□□□ -2.03
SNIP1Q8TAD8 RNA5SP192-201ENST00000364404 120 ntBASIC2.35□□□□□ -2.03
SNIP1Q8TAD8 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms