Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-1052P-201ENST00000411398 104 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 SNRPGP8-201ENST00000454064 226 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 RNU6-719P-201ENST00000516671 104 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 MIR3139-201ENST00000579145 76 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 TPTEP1-208ENST00000636884 213 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.2-201ENST00000362330 96 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 SNORA33.1-201ENST00000364957 130 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.462-201ENST00000384268 102 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.622-201ENST00000411091 108 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 AL593851.1-201ENST00000426171 157 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 RNU7-88P-201ENST00000458752 63 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 MIR5688-201ENST00000580619 83 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-3.64□□□□□ -2.99
LINC00643Q86TS7 RNU6-1014P-201ENST00000383940 103 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 RNU6-1000P-201ENST00000391066 106 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 MIR548Q-201ENST00000408404 100 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 FGF7P7-201ENST00000514120 227 ntBASIC-3.65□□□□□ -2.99
LINC00643Q86TS7 SNORD113-6-201ENST00000363345 75 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 Y_RNA.357-201ENST00000365487 109 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 RNU4-88P-201ENST00000411220 86 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 AC009161.1-201ENST00000417306 376 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 AC019235.1-201ENST00000503847 207 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 AC007485.1-201ENST00000616755 206 ntBASIC-3.66□□□□□ -3
LINC00643Q86TS7 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.67□□□□□ -3
LINC00643Q86TS7 RNU6-648P-201ENST00000410190 107 ntBASIC-3.67□□□□□ -3
LINC00643Q86TS7 AC138393.2-201ENST00000414742 246 ntBASIC-3.67□□□□□ -3
LINC00643Q86TS7 MTCO2P4-201ENST00000517968 247 ntBASIC-3.67□□□□□ -3
LINC00643Q86TS7 AL512360.1-201ENST00000555346 234 ntBASIC-3.67□□□□□ -3
LINC00643Q86TS7 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.68□□□□□ -3
LINC00643Q86TS7 MRPS35P2-201ENST00000508242 191 ntBASIC-3.68□□□□□ -3
LINC00643Q86TS7 U7.5-201ENST00000517224 61 ntBASIC-3.68□□□□□ -3
LINC00643Q86TS7 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.69□□□□□ -3
LINC00643Q86TS7 RNU6-616P-201ENST00000384353 107 ntBASIC-3.69□□□□□ -3
LINC00643Q86TS7 Y_RNA.615-201ENST00000410769 117 ntBASIC-3.69□□□□□ -3
LINC00643Q86TS7 Y_RNA.473-201ENST00000384333 102 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 RNU6-906P-201ENST00000384700 70 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 MIR548A1-201ENST00000385041 97 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 AC006006.1-201ENST00000603082 144 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 AL157392.4-201ENST00000609756 345 ntBASIC-3.7□□□□□ -3
LINC00643Q86TS7 Y_RNA.414-201ENST00000384011 101 ntBASIC-3.71□□□□□ -3
LINC00643Q86TS7 RNU6-764P-201ENST00000516396 105 ntBASIC-3.71□□□□□ -3
LINC00643Q86TS7 RNU6-99P-201ENST00000364721 107 ntBASIC-3.72□□□□□ -3
LINC00643Q86TS7 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.72□□□□□ -3
LINC00643Q86TS7 MT-TM-201ENST00000387377 68 ntBASIC-3.72□□□□□ -3
LINC00643Q86TS7 RNU6-507P-201ENST00000516045 100 ntBASIC-3.72□□□□□ -3
LINC00643Q86TS7 RNU6-690P-201ENST00000365242 106 ntBASIC-3.73□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.577-201ENST00000384794 101 ntBASIC-3.74□□□□□ -3.01
LINC00643Q86TS7 MIR519A2-201ENST00000384990 87 ntBASIC-3.74□□□□□ -3.01
LINC00643Q86TS7 RNU6-835P-201ENST00000516974 104 ntBASIC-3.74□□□□□ -3.01
LINC00643Q86TS7 AC022079.1-201ENST00000621546 602 ntBASIC-3.74□□□□□ -3.01
LINC00643Q86TS7 MIR3662-201ENST00000637030 95 ntBASIC-3.74□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.24-201ENST00000362508 103 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.199-201ENST00000364014 102 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 RNY3-201ENST00000365484 102 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 PMCHL1-202ENST00000423102 261 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 RNU7-24P-201ENST00000458867 62 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 RNU6-358P-201ENST00000516564 75 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 MIR23C-201ENST00000579846 100 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 MIR466-201ENST00000580653 84 ntBASIC-3.75□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.594-201ENST00000410373 140 ntBASIC-3.76□□□□□ -3.01
LINC00643Q86TS7 RNU6-1064P-201ENST00000410626 104 ntBASIC-3.76□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 MIR496-201ENST00000385226 102 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 SNORA19.1-201ENST00000410656 129 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 snoU13.17-201ENST00000458802 104 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 RNU6-273P-201ENST00000516937 96 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 RNU6-1213P-201ENST00000517075 94 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.77□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.424-201ENST00000384063 103 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 MIR624-201ENST00000385217 97 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 RNU6-258P-201ENST00000390884 101 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 MIR1207-201ENST00000408249 87 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 RNU6-864P-201ENST00000516256 108 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 RNA5SP147-201ENST00000516493 109 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 AP003461.1-201ENST00000528866 78 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 C8orf59P2-201ENST00000603441 271 ntBASIC-3.78□□□□□ -3.01
LINC00643Q86TS7 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 AC073114.1-201ENST00000612027 490 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 AC090617.10-201ENST00000624308 134 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 AC068137.3-201ENST00000639191 341 ntBASIC-3.79□□□□□ -3.02
LINC00643Q86TS7 RNU6-1068P-201ENST00000410958 103 ntBASIC-3.8□□□□□ -3.02
LINC00643Q86TS7 AC005899.2-201ENST00000584353 90 ntBASIC-3.8□□□□□ -3.02
LINC00643Q86TS7 RNU6-1272P-201ENST00000362776 107 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 RNU6-260P-201ENST00000384092 107 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 RNU6-246P-201ENST00000384702 107 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 MT-TT-201ENST00000387460 66 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 RNU6-1050P-201ENST00000410388 107 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 RNU7-164P-201ENST00000459221 62 ntBASIC-3.81□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms