Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR942-201ENST00000401111 86 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.87□□□□□ -2.11
ATG4DQ86TL0 RNU7-193P-201ENST00000516723 65 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 MIR101-2-201ENST00000362195 79 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 RNA5SP432-201ENST00000362480 116 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.239-201ENST00000364444 113 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 RNU6-471P-201ENST00000383944 106 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 MT-TN-201ENST00000387400 73 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 MIR2113-201ENST00000459007 91 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.86□□□□□ -2.11
ATG4DQ86TL0 AC005520.4-201ENST00000604337 90 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
ATG4DQ86TL0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
ATG4DQ86TL0 MTND4LP19-201ENST00000403051 166 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 JTBP1-201ENST00000441314 247 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
ATG4DQ86TL0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ATG4DQ86TL0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ATG4DQ86TL0 RNU6-664P-201ENST00000362381 107 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 RNU4-52P-201ENST00000384209 138 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 SNORD45A-201ENST00000384512 84 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4DQ86TL0 MIR4529-201ENST00000578110 78 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 MIR4696-201ENST00000581431 70 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 U6.100-201ENST00000636230 99 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
ATG4DQ86TL0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATG4DQ86TL0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
ATG4DQ86TL0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ATG4DQ86TL0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATG4DQ86TL0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ATG4DQ86TL0 MIR504-201ENST00000385065 83 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 RNU6-630P-201ENST00000391258 106 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 SNORD23.1-201ENST00000408212 104 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 snoU13.21-201ENST00000459368 105 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 RNU6-719P-201ENST00000516671 104 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 AP003716.2-201ENST00000528260 108 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
ATG4DQ86TL0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ATG4DQ86TL0 MIR103A2-201ENST00000362154 78 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 Y_RNA.13-201ENST00000362403 112 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 SNORD101-201ENST00000384027 73 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 AC092628.1-201ENST00000436250 252 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 MIR3675-201ENST00000583661 73 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.82□□□□□ -2.12
ATG4DQ86TL0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.82□□□□□ -2.12
ATG4DQ86TL0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ATG4DQ86TL0 RNY4P3-201ENST00000365254 95 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 RNU6-895P-201ENST00000384125 103 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 MIR17-201ENST00000385012 84 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 AC093423.1-201ENST00000440817 142 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 MIR18B-201ENST00000454574 71 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 MIR548H5-201ENST00000580314 60 ntBASIC1.81□□□□□ -2.12
ATG4DQ86TL0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
ATG4DQ86TL0 AC023934.1-201ENST00000574529 2389 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 MIR377-201ENST00000362145 69 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 RNU6-987P-201ENST00000384759 104 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ATG4DQ86TL0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ATG4DQ86TL0 RNU4-37P-201ENST00000410214 84 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ATG4DQ86TL0 RNU7-185P-201ENST00000459215 60 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 AL133373.1-201ENST00000497098 94 ntBASIC1.8□□□□□ -2.12
ATG4DQ86TL0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.8□□□□□ -2.12
ATG4DQ86TL0 RNA5SP264-201ENST00000363115 107 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 SNORD45.1-201ENST00000363181 77 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 RNU6-824P-201ENST00000363724 104 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 RNU6-580P-201ENST00000365159 107 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 MIR519A1-201ENST00000385257 85 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 MIR4524B-201ENST00000581569 115 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
ATG4DQ86TL0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms