Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC013791.1-201ENST00000616619 62 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 RNU6-664P-201ENST00000362381 107 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 SNORD36A-201ENST00000362874 73 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 RNU6-990P-201ENST00000364385 104 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.348-201ENST00000365403 103 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 MIR181A1-201ENST00000385026 110 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 RNU2-55P-201ENST00000411146 174 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 RNU6-566P-201ENST00000516790 107 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 RNU7-110P-201ENST00000516891 62 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-3□□□□□ -2.89
CCDC58Q4VC31 RNU6-235P-201ENST00000362644 107 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 SNORD27-201ENST00000363981 72 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 SNORA40.4-201ENST00000390971 128 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 RNU6-935P-201ENST00000410371 100 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 RNU6-1016P-201ENST00000516689 94 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 AC005899.2-201ENST00000584353 90 ntBASIC-3.01□□□□□ -2.89
CCDC58Q4VC31 RNU6-472P-201ENST00000384299 107 ntBASIC-3.02□□□□□ -2.89
CCDC58Q4VC31 RNU6-1050P-201ENST00000410388 107 ntBASIC-3.02□□□□□ -2.89
CCDC58Q4VC31 MIR376B-201ENST00000614515 100 ntBASIC-3.02□□□□□ -2.89
CCDC58Q4VC31 U6.92-201ENST00000636464 89 ntBASIC-3.02□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.23-201ENST00000362496 106 ntBASIC-3.03□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.03□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.03□□□□□ -2.89
CCDC58Q4VC31 RNU6-243P-201ENST00000391140 107 ntBASIC-3.03□□□□□ -2.89
CCDC58Q4VC31 RNU6-570P-201ENST00000517051 105 ntBASIC-3.03□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.182-201ENST00000363880 111 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 RNU5E-4P-201ENST00000364931 120 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.301-201ENST00000364990 103 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 MIR451A-201ENST00000385059 72 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 RPS3AP52-201ENST00000435639 297 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 AC073114.1-201ENST00000612027 490 ntBASIC-3.04□□□□□ -2.9
CCDC58Q4VC31 RNU6-1085P-201ENST00000363576 107 ntBASIC-3.05□□□□□ -2.9
CCDC58Q4VC31 SNORD54-201ENST00000459159 67 ntBASIC-3.05□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.655-201ENST00000515919 96 ntBASIC-3.05□□□□□ -2.9
CCDC58Q4VC31 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-3.05□□□□□ -2.9
CCDC58Q4VC31 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.05□□□□□ -2.9
CCDC58Q4VC31 RNU6-845P-201ENST00000362578 103 ntBASIC-3.06□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.06□□□□□ -2.9
CCDC58Q4VC31 U3.27-201ENST00000391237 200 ntBASIC-3.06□□□□□ -2.9
CCDC58Q4VC31 RNU6-191P-201ENST00000516295 94 ntBASIC-3.06□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.293-201ENST00000364908 93 ntBASIC-3.07□□□□□ -2.9
CCDC58Q4VC31 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-3.07□□□□□ -2.9
CCDC58Q4VC31 RNU6-307P-201ENST00000516743 106 ntBASIC-3.07□□□□□ -2.9
CCDC58Q4VC31 AC009779.6-201ENST00000603972 165 ntBASIC-3.07□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 RNU6-593P-201ENST00000364716 112 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 RNY1P6-201ENST00000384193 109 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.556-201ENST00000384677 113 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 MIR526A2-201ENST00000390198 65 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 MIR5692C2-201ENST00000577959 77 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 RNU2-4P-201ENST00000606190 192 ntBASIC-3.08□□□□□ -2.9
CCDC58Q4VC31 Y_RNA.380-201ENST00000365663 111 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 RNU6-1040P-201ENST00000383974 107 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 RNU6-1013P-201ENST00000384180 107 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 RNU7-88P-201ENST00000458752 63 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 AP002392.1-201ENST00000537692 208 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 MIR4790-201ENST00000577799 79 ntBASIC-3.09□□□□□ -2.9
CCDC58Q4VC31 RNU6-1014P-201ENST00000383940 103 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.531-201ENST00000384589 121 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 RNU6-332P-201ENST00000391193 108 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 SEPT14P8-201ENST00000508026 178 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 AL512360.1-201ENST00000555346 234 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 CYP3A54P-201ENST00000566950 75 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 MIR5688-201ENST00000580619 83 ntBASIC-3.1□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.117-201ENST00000363294 101 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 SNORD11.1-201ENST00000459482 85 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 RNU7-2P-201ENST00000516096 62 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 U7.5-201ENST00000517224 61 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 AL365205.2-201ENST00000594586 68 ntBASIC-3.11□□□□□ -2.91
CCDC58Q4VC31 RNU6-495P-201ENST00000362995 107 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 SNORA33.1-201ENST00000364957 130 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 MTND5P5-201ENST00000503764 376 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 AC019235.1-201ENST00000503847 207 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 RNU7-154P-201ENST00000516194 62 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 SCARNA15-202ENST00000516881 127 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 RNU7-4P-201ENST00000516961 62 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 MIR466-201ENST00000580653 84 ntBASIC-3.12□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.389-201ENST00000383924 113 ntBASIC-3.13□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.13□□□□□ -2.91
CCDC58Q4VC31 RNU5A-2P-201ENST00000384337 116 ntBASIC-3.13□□□□□ -2.91
CCDC58Q4VC31 Z83846.1-201ENST00000446798 265 ntBASIC-3.13□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.360-201ENST00000365512 102 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 RNU6-258P-201ENST00000390884 101 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 AL162413.1-201ENST00000603198 110 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 AC084782.3-201ENST00000612282 578 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 AC007485.1-201ENST00000616755 206 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 AC073869.6-201ENST00000640656 341 ntBASIC-3.14□□□□□ -2.91
CCDC58Q4VC31 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 MIR628-201ENST00000385229 95 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 RNU6-1052P-201ENST00000411398 104 ntBASIC-3.15□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 280.5 ms