Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC025627.3-201ENST00000582078 182 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 uc_338.28-201ENST00000612082 187 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 AL442128.1-201ENST00000615151 90 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 RNU6-44P-201ENST00000384045 107 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 RNU6-554P-201ENST00000410466 106 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 AC090897.1-201ENST00000580909 226 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
SSRP1Q08945 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
SSRP1Q08945 RNU6-832P-201ENST00000363319 107 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 SNORD38.1-201ENST00000363863 68 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 RNU6-42P-201ENST00000384165 107 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 MIR520H-201ENST00000385126 88 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 RNU6-1006P-201ENST00000516998 103 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 AC141557.1-201ENST00000540982 400 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 MIR4500-201ENST00000579472 76 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 AC096720.1-201ENST00000604441 183 ntBASIC1.25□□□□□ -2.21
SSRP1Q08945 RNU6-1099P-201ENST00000363533 107 ntBASIC1.24□□□□□ -2.21
SSRP1Q08945 AC008608.1-201ENST00000603910 127 ntBASIC1.24□□□□□ -2.21
SSRP1Q08945 MIR6734-201ENST00000621166 68 ntBASIC1.24□□□□□ -2.21
SSRP1Q08945 HSBP1P2-201ENST00000299671 229 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 SNORA63.4-201ENST00000362763 126 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 Y_RNA.78-201ENST00000362970 110 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 RNU4-36P-201ENST00000364294 144 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 RNA5SP220-201ENST00000516298 104 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 AP003327.1-201ENST00000529684 127 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
SSRP1Q08945 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
SSRP1Q08945 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 RNU6-1335P-201ENST00000365426 107 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 Y_RNA.466-201ENST00000384294 113 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 RNU6-1113P-201ENST00000384348 107 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 AC013244.2-201ENST00000603396 103 ntBASIC1.22□□□□□ -2.21
SSRP1Q08945 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.22□□□□□ -2.21
SSRP1Q08945 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SSRP1Q08945 AL031737.1-201ENST00000450125 223 ntBASIC1.21□□□□□ -2.22
SSRP1Q08945 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
SSRP1Q08945 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SSRP1Q08945 MIR101-2-201ENST00000362195 79 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 Y_RNA.81-201ENST00000362997 102 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 Y_RNA.247-201ENST00000364500 92 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 SNORA51.5-201ENST00000384126 131 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 RNU6-904P-201ENST00000516206 101 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 RNU6-448P-201ENST00000517052 107 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 MTND5P40-201ENST00000559945 246 ntBASIC1.2□□□□□ -2.22
SSRP1Q08945 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.2□□□□□ -2.22
SSRP1Q08945 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
SSRP1Q08945 RNU6-766P-201ENST00000362478 107 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 RNU6-756P-201ENST00000383997 107 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 Y_RNA.697-201ENST00000516776 113 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 RNU6-90P-201ENST00000606352 106 ntBASIC1.19□□□□□ -2.22
SSRP1Q08945 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SSRP1Q08945 MIR548G-201ENST00000408442 89 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 Y_RNA.601-201ENST00000410500 113 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 SNORA19.1-201ENST00000410656 129 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 AC004941.2-201ENST00000427009 228 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 SPINT5P-201ENST00000448174 155 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 Y_RNA.659-201ENST00000515994 113 ntBASIC1.18□□□□□ -2.22
SSRP1Q08945 SNORD45B-201ENST00000364617 72 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 RNU6-571P-201ENST00000384128 107 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 BX276092.1-201ENST00000427368 251 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 MIR3613-201ENST00000579844 87 ntBASIC1.17□□□□□ -2.22
SSRP1Q08945 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
SSRP1Q08945 Y_RNA.536-201ENST00000384621 113 ntBASIC1.16□□□□□ -2.22
SSRP1Q08945 SNORD100-201ENST00000408573 76 ntBASIC1.16□□□□□ -2.22
SSRP1Q08945 SNORD99-201ENST00000408612 74 ntBASIC1.16□□□□□ -2.22
SSRP1Q08945 MIR548H5-201ENST00000580314 60 ntBASIC1.16□□□□□ -2.22
SSRP1Q08945 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SSRP1Q08945 MIR450A1-201ENST00000362262 91 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 Y_RNA.56-201ENST00000362798 112 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SSRP1Q08945 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.15□□□□□ -2.23
SSRP1Q08945 RNU7-10P-201ENST00000607194 63 ntBASIC1.15□□□□□ -2.23
SSRP1Q08945 RNU6-291P-201ENST00000384720 107 ntBASIC1.14□□□□□ -2.23
SSRP1Q08945 MIR590-201ENST00000385008 97 ntBASIC1.14□□□□□ -2.23
SSRP1Q08945 SCARNA23-201ENST00000516060 130 ntBASIC1.14□□□□□ -2.23
SSRP1Q08945 MIR4439-201ENST00000583746 80 ntBASIC1.14□□□□□ -2.23
SSRP1Q08945 Y_RNA.818-201ENST00000618813 71 ntBASIC1.14□□□□□ -2.23
SSRP1Q08945 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SSRP1Q08945 AC002350.1-201ENST00000490759 375 ntBASIC1.13□□□□□ -2.23
SSRP1Q08945 RNU6-850P-201ENST00000516934 103 ntBASIC1.13□□□□□ -2.23
SSRP1Q08945 RNU6-537P-201ENST00000517277 103 ntBASIC1.13□□□□□ -2.23
SSRP1Q08945 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
SSRP1Q08945 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
SSRP1Q08945 Y_RNA.173-201ENST00000363776 113 ntBASIC1.12□□□□□ -2.23
SSRP1Q08945 RNU6-147P-201ENST00000383983 107 ntBASIC1.12□□□□□ -2.23
SSRP1Q08945 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
SSRP1Q08945 MIR6767-201ENST00000637302 66 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms