Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 Y_RNA.712-201ENST00000517011 92 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 RNA5SP330-201ENST00000517096 96 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 AL109933.3-201ENST00000619095 188 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 U6.109-201ENST00000636749 87 ntBASIC0.51□□□□□ -2.33
RIPK4P57078 SNORD115-19-201ENST00000363098 82 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD115-18-201ENST00000363293 82 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 Y_RNA.127-201ENST00000363386 109 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 RNA5SP245-201ENST00000364239 121 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD115-17-201ENST00000364612 82 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD116-14-201ENST00000383894 92 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD116-17-201ENST00000383929 92 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 Y_RNA.448-201ENST00000384185 108 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD116-15-201ENST00000384445 92 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD116-19-201ENST00000384729 92 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 MIR573-201ENST00000384964 99 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 RNU7-2P-201ENST00000516096 62 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 RNU6-1333P-201ENST00000516162 93 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 SNORD33.1-201ENST00000516213 88 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 RNU6-521P-201ENST00000516663 105 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
RIPK4P57078 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
RIPK4P57078 Y_RNA.119-201ENST00000363301 96 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 Y_RNA.353-201ENST00000365440 108 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 SNORA72.6-201ENST00000384520 129 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 MIR548D2-201ENST00000384955 97 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 MIR548A1-201ENST00000385041 97 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 TMSB4XP3-201ENST00000445144 114 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 MIR376B-201ENST00000614515 100 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 AL035470.1-201ENST00000622571 220 ntBASIC0.49□□□□□ -2.33
RIPK4P57078 MIR18A-201ENST00000362310 71 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 RNY1P2-201ENST00000364820 117 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 MIR34C-201ENST00000384831 77 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 SNORD100-201ENST00000408573 76 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 RPL39P25-201ENST00000449384 154 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 Y_RNA.681-201ENST00000516445 113 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 RNU6-448P-201ENST00000517052 107 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 uc_338.16-201ENST00000621804 95 ntBASIC0.48□□□□□ -2.33
RIPK4P57078 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RIPK4P57078 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
RIPK4P57078 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 Y_RNA.247-201ENST00000364500 92 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 Y_RNA.362-201ENST00000365518 110 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 RNU6-22P-201ENST00000384355 107 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 RNU6-291P-201ENST00000384720 107 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 MIR644A-201ENST00000385262 94 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 SNORD77B-201ENST00000391112 67 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 SNORA7.5-201ENST00000410672 110 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 RNA5SP222-201ENST00000411039 105 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 RNU7-48P-201ENST00000458875 63 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 SNORA31.14-201ENST00000516728 116 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 MIR4500-201ENST00000579472 76 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.47□□□□□ -2.33
RIPK4P57078 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 AC132825.6-201ENST00000638861 357 ntBASIC0.47□□□□□ -2.33
RIPK4P57078 Y_RNA.32-201ENST00000362589 110 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 RNU6-363P-201ENST00000362895 105 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 SNORA63.5-201ENST00000363548 123 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 Y_RNA.258-201ENST00000364613 105 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 SNORD113-1-201ENST00000365321 69 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 Y_RNA.346-201ENST00000365385 112 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 Y_RNA.536-201ENST00000384621 113 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 Y_RNA.563-201ENST00000384707 108 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 RNU6-1168P-201ENST00000390831 104 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 BX276092.1-201ENST00000427368 251 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 AL606753.1-201ENST00000427435 87 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 RNU6-765P-201ENST00000516916 99 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 RNU6-1006P-201ENST00000516998 103 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 DEFB131E-201ENST00000532329 154 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 AC007012.1-201ENST00000567192 175 ntBASIC0.46□□□□□ -2.34
RIPK4P57078 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 RNY4P6-201ENST00000363667 96 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 RNU4-67P-201ENST00000364569 141 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 Y_RNA.360-201ENST00000365512 102 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 Y_RNA.649-201ENST00000459077 103 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 MIR3613-201ENST00000579844 87 ntBASIC0.45□□□□□ -2.34
RIPK4P57078 Y_RNA.98-201ENST00000363109 102 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 SNORA36.2-201ENST00000384004 127 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 RNU6-429P-201ENST00000384582 108 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 RNU6-535P-201ENST00000384722 107 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 MIR759-201ENST00000390224 91 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 RNU6-406P-201ENST00000516470 107 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 Y_RNA.697-201ENST00000516776 113 ntBASIC0.44□□□□□ -2.34
RIPK4P57078 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.44□□□□□ -2.34
RIPK4P57078 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms