Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 MIR516A2-201ENST00000384888 90 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 MIR516A1-201ENST00000385033 90 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 MIR496-201ENST00000385226 102 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU6-466P-201ENST00000391224 103 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU4-14P-201ENST00000410858 122 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU6-453P-201ENST00000516819 85 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 SNORD115-25-201ENST00000362619 82 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 MIR29B1-201ENST00000385015 81 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 AL606845.1-201ENST00000404881 255 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 HSPE1P25-201ENST00000455484 251 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 SCARNA15-202ENST00000516881 127 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.53□□□□□ -2.65
NUP98P52948 SNORD18.1-201ENST00000363807 70 ntBASIC-1.53□□□□□ -2.65
NUP98P52948 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
NUP98P52948 snoU18.1-201ENST00000629629 71 ntBASIC-1.53□□□□□ -2.65
NUP98P52948 MIR3974-201ENST00000637126 96 ntBASIC-1.53□□□□□ -2.65
NUP98P52948 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 U4.1-201ENST00000620349 87 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 RNA5SP93-201ENST00000362525 114 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 SNORD113-8-201ENST00000363497 74 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 RNU6-588P-201ENST00000410281 105 ntBASIC-1.54□□□□□ -2.66
NUP98P52948 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.54□□□□□ -2.66
NUP98P52948 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 RNY4P28-201ENST00000365281 93 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 SNORA32-201ENST00000384072 121 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 SNORA51.5-201ENST00000384126 131 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 RNU6-571P-201ENST00000384128 107 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 MIR624-201ENST00000385217 97 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 RNU6-570P-201ENST00000517051 105 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 MIR376A1-201ENST00000616574 68 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 AC091912.2-201ENST00000624798 167 ntBASIC-1.55□□□□□ -2.66
NUP98P52948 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 RNU6-310P-201ENST00000384655 107 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 RNU2-51P-201ENST00000410708 197 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 AC025253.1-201ENST00000613623 543 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 AP001362.1-201ENST00000625165 124 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 RNU6-890P-201ENST00000384121 107 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 MIR548H1-201ENST00000408610 102 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 RNU4-61P-201ENST00000411243 107 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 MIR4272-201ENST00000635924 64 ntBASIC-1.56□□□□□ -2.66
NUP98P52948 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.57□□□□□ -2.66
NUP98P52948 MIR1270-201ENST00000459320 83 ntBASIC-1.57□□□□□ -2.66
NUP98P52948 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.58□□□□□ -2.66
NUP98P52948 AL606534.2-204ENST00000635008 178 ntBASIC-1.58□□□□□ -2.66
NUP98P52948 RNU6-228P-201ENST00000362700 106 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 RNU6-312P-201ENST00000364629 107 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 MIRLET7B-201ENST00000385140 83 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.59□□□□□ -2.66
NUP98P52948 RNU6-845P-201ENST00000362578 103 ntBASIC-1.6□□□□□ -2.67
NUP98P52948 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.6□□□□□ -2.67
NUP98P52948 RNU6-704P-201ENST00000364162 103 ntBASIC-1.6□□□□□ -2.67
NUP98P52948 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.6□□□□□ -2.67
NUP98P52948 MIR548AE2-201ENST00000583456 67 ntBASIC-1.6□□□□□ -2.67
NUP98P52948 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 SNORA26.4-201ENST00000391188 123 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.61□□□□□ -2.67
NUP98P52948 SNORD116-25-201ENST00000516517 92 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 AC113139.1-201ENST00000605049 239 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 AC037487.3-201ENST00000606668 112 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 SNORD58B-201ENST00000607313 66 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 AC103591.3-201ENST00000608684 209 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-664P-201ENST00000362381 107 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 SNORD36A-201ENST00000362874 73 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-164P-201ENST00000364604 103 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-243P-201ENST00000391140 107 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-337P-201ENST00000391243 106 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-130P-201ENST00000411112 103 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.61□□□□□ -2.67
NUP98P52948 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU7-2P-201ENST00000516096 62 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.61□□□□□ -2.67
NUP98P52948 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms