Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
CLK3P49761 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
CLK3P49761 RNU4-83P-201ENST00000410863 133 ntBASIC1.41□□□□□ -2.18
CLK3P49761 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.41□□□□□ -2.18
CLK3P49761 SNORD4B-201ENST00000459083 72 ntBASIC1.41□□□□□ -2.18
CLK3P49761 RN7SKP88-201ENST00000516847 250 ntBASIC1.41□□□□□ -2.18
CLK3P49761 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
CLK3P49761 7SK.8-201ENST00000612110 250 ntBASIC1.41□□□□□ -2.18
CLK3P49761 7SK.11-201ENST00000615477 250 ntBASIC1.41□□□□□ -2.18
CLK3P49761 7SK.13-201ENST00000622040 250 ntBASIC1.41□□□□□ -2.18
CLK3P49761 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CLK3P49761 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
CLK3P49761 RNU1-17P-201ENST00000363022 152 ntBASIC1.4□□□□□ -2.19
CLK3P49761 RNU6-580P-201ENST00000365159 107 ntBASIC1.4□□□□□ -2.19
CLK3P49761 MIR1236-201ENST00000408340 102 ntBASIC1.4□□□□□ -2.19
CLK3P49761 AC140658.3-201ENST00000567603 271 ntBASIC1.4□□□□□ -2.19
CLK3P49761 MIR4524B-201ENST00000581569 115 ntBASIC1.4□□□□□ -2.19
CLK3P49761 MIR4662A-201ENST00000637499 67 ntBASIC1.4□□□□□ -2.19
CLK3P49761 MIR103A2-201ENST00000362154 78 ntBASIC1.39□□□□□ -2.19
CLK3P49761 Y_RNA.94-201ENST00000363068 106 ntBASIC1.39□□□□□ -2.19
CLK3P49761 BX276092.1-201ENST00000427368 251 ntBASIC1.39□□□□□ -2.19
CLK3P49761 MIR18B-201ENST00000454574 71 ntBASIC1.39□□□□□ -2.19
CLK3P49761 Y_RNA.648-201ENST00000459455 110 ntBASIC1.39□□□□□ -2.19
CLK3P49761 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
CLK3P49761 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
CLK3P49761 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CLK3P49761 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.38□□□□□ -2.19
CLK3P49761 uc_338.6-201ENST00000613544 171 ntBASIC1.38□□□□□ -2.19
CLK3P49761 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLK3P49761 RNU7-85P-201ENST00000458851 63 ntBASIC1.37□□□□□ -2.19
CLK3P49761 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
CLK3P49761 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.37□□□□□ -2.19
CLK3P49761 MIR4712-201ENST00000583750 82 ntBASIC1.37□□□□□ -2.19
CLK3P49761 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLK3P49761 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLK3P49761 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.36□□□□□ -2.19
CLK3P49761 RNU4-58P-201ENST00000363192 141 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU4-32P-201ENST00000363404 141 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU6-654P-201ENST00000364373 107 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU6-53P-201ENST00000365367 106 ntBASIC1.36□□□□□ -2.19
CLK3P49761 SNORA72.6-201ENST00000384520 129 ntBASIC1.36□□□□□ -2.19
CLK3P49761 MIR764-201ENST00000390811 85 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU6-482P-201ENST00000391068 107 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU6-1254P-201ENST00000391266 104 ntBASIC1.36□□□□□ -2.19
CLK3P49761 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.36□□□□□ -2.19
CLK3P49761 RNU7-153P-201ENST00000516455 62 ntBASIC1.36□□□□□ -2.19
CLK3P49761 MIR4491-201ENST00000581087 68 ntBASIC1.36□□□□□ -2.19
CLK3P49761 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.36□□□□□ -2.19
CLK3P49761 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CLK3P49761 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLK3P49761 RNU6-315P-201ENST00000362666 107 ntBASIC1.35□□□□□ -2.19
CLK3P49761 SNORD36A-201ENST00000362874 73 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RNU6-776P-201ENST00000364403 104 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RNU6-1022P-201ENST00000365049 104 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RNU1-36P-201ENST00000365130 165 ntBASIC1.35□□□□□ -2.19
CLK3P49761 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
CLK3P49761 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
CLK3P49761 SNORD93-201ENST00000408813 74 ntBASIC1.35□□□□□ -2.19
CLK3P49761 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
CLK3P49761 SNORA25.13-201ENST00000516395 103 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RNU6-531P-201ENST00000516694 104 ntBASIC1.35□□□□□ -2.19
CLK3P49761 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
CLK3P49761 MIR516A2-201ENST00000384888 90 ntBASIC1.34□□□□□ -2.19
CLK3P49761 MIR516A1-201ENST00000385033 90 ntBASIC1.34□□□□□ -2.19
CLK3P49761 RNU6-243P-201ENST00000391140 107 ntBASIC1.34□□□□□ -2.19
CLK3P49761 RNA5SP95-201ENST00000410319 137 ntBASIC1.34□□□□□ -2.19
CLK3P49761 RNU6-1194P-201ENST00000516208 104 ntBASIC1.34□□□□□ -2.19
CLK3P49761 SNORA25.16-201ENST00000516741 121 ntBASIC1.34□□□□□ -2.19
CLK3P49761 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
CLK3P49761 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLK3P49761 RNU6-624P-201ENST00000363411 107 ntBASIC1.33□□□□□ -2.2
CLK3P49761 Y_RNA.508-201ENST00000384502 114 ntBASIC1.33□□□□□ -2.2
CLK3P49761 RNU6-129P-201ENST00000391022 107 ntBASIC1.33□□□□□ -2.2
CLK3P49761 MIR4536-1-201ENST00000583537 88 ntBASIC1.33□□□□□ -2.2
CLK3P49761 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
CLK3P49761 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
CLK3P49761 snoU13.11-201ENST00000459219 104 ntBASIC1.32□□□□□ -2.2
CLK3P49761 RNU6-65P-201ENST00000516332 98 ntBASIC1.32□□□□□ -2.2
CLK3P49761 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
CLK3P49761 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
CLK3P49761 RNU6-403P-201ENST00000363163 104 ntBASIC1.31□□□□□ -2.2
CLK3P49761 Y_RNA.283-201ENST00000364798 112 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU6-811P-201ENST00000384069 107 ntBASIC1.31□□□□□ -2.2
CLK3P49761 SNORD63B-201ENST00000411005 70 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU6-1054P-201ENST00000411293 104 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU7-185P-201ENST00000459215 60 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU7-106P-201ENST00000459514 67 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU6-557P-201ENST00000516842 110 ntBASIC1.31□□□□□ -2.2
CLK3P49761 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU7-10P-201ENST00000607194 63 ntBASIC1.31□□□□□ -2.2
CLK3P49761 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.31□□□□□ -2.2
CLK3P49761 RNU6-466P-201ENST00000391224 103 ntBASIC1.3□□□□□ -2.2
CLK3P49761 MIR1257-201ENST00000408490 117 ntBASIC1.3□□□□□ -2.2
CLK3P49761 SNORD100-201ENST00000408573 76 ntBASIC1.3□□□□□ -2.2
CLK3P49761 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
CLK3P49761 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.3□□□□□ -2.2
CLK3P49761 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
CLK3P49761 MIR548H5-201ENST00000580314 60 ntBASIC1.3□□□□□ -2.2
CLK3P49761 MIR4796-201ENST00000580742 81 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 350.7 ms