Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
SOX3P41225 RNU6-521P-201ENST00000516663 105 ntBASIC0.49□□□□□ -2.33
SOX3P41225 SNORA31.14-201ENST00000516728 116 ntBASIC0.49□□□□□ -2.33
SOX3P41225 Y_RNA.712-201ENST00000517011 92 ntBASIC0.49□□□□□ -2.33
SOX3P41225 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
SOX3P41225 AL365222.1-201ENST00000614661 98 ntBASIC0.49□□□□□ -2.33
SOX3P41225 AL035470.1-201ENST00000622571 220 ntBASIC0.49□□□□□ -2.33
SOX3P41225 Y_RNA.466-201ENST00000384294 113 ntBASIC0.48□□□□□ -2.33
SOX3P41225 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
SOX3P41225 RNU6-1194P-201ENST00000516208 104 ntBASIC0.48□□□□□ -2.33
SOX3P41225 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
SOX3P41225 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
SOX3P41225 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
SOX3P41225 Y_RNA.127-201ENST00000363386 109 ntBASIC0.47□□□□□ -2.33
SOX3P41225 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
SOX3P41225 Y_RNA.247-201ENST00000364500 92 ntBASIC0.47□□□□□ -2.33
SOX3P41225 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
SOX3P41225 SNORD116-14-201ENST00000383894 92 ntBASIC0.47□□□□□ -2.33
SOX3P41225 SNORD116-17-201ENST00000383929 92 ntBASIC0.47□□□□□ -2.33
SOX3P41225 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
SOX3P41225 SNORD116-15-201ENST00000384445 92 ntBASIC0.47□□□□□ -2.33
SOX3P41225 Y_RNA.536-201ENST00000384621 113 ntBASIC0.47□□□□□ -2.33
SOX3P41225 SNORD116-19-201ENST00000384729 92 ntBASIC0.47□□□□□ -2.33
SOX3P41225 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
SOX3P41225 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
SOX3P41225 AL603908.1-201ENST00000406098 201 ntBASIC0.47□□□□□ -2.33
SOX3P41225 RNU7-48P-201ENST00000458875 63 ntBASIC0.47□□□□□ -2.33
SOX3P41225 RNU6-1333P-201ENST00000516162 93 ntBASIC0.47□□□□□ -2.33
SOX3P41225 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
SOX3P41225 RNU4-58P-201ENST00000363192 141 ntBASIC0.46□□□□□ -2.34
SOX3P41225 SNORA36.1-201ENST00000363424 132 ntBASIC0.46□□□□□ -2.34
SOX3P41225 Y_RNA.174-201ENST00000363781 105 ntBASIC0.46□□□□□ -2.34
SOX3P41225 Y_RNA.353-201ENST00000365440 108 ntBASIC0.46□□□□□ -2.34
SOX3P41225 Y_RNA.362-201ENST00000365518 110 ntBASIC0.46□□□□□ -2.34
SOX3P41225 SNORD77B-201ENST00000391112 67 ntBASIC0.46□□□□□ -2.34
SOX3P41225 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
SOX3P41225 Y_RNA.697-201ENST00000516776 113 ntBASIC0.46□□□□□ -2.34
SOX3P41225 RNU6-1006P-201ENST00000516998 103 ntBASIC0.46□□□□□ -2.34
SOX3P41225 RNU6-535P-201ENST00000384722 107 ntBASIC0.45□□□□□ -2.34
SOX3P41225 MIR548A1-201ENST00000385041 97 ntBASIC0.45□□□□□ -2.34
SOX3P41225 BX276092.1-201ENST00000427368 251 ntBASIC0.45□□□□□ -2.34
SOX3P41225 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
SOX3P41225 DEFB131E-201ENST00000532329 154 ntBASIC0.45□□□□□ -2.34
SOX3P41225 MIR4500-201ENST00000579472 76 ntBASIC0.45□□□□□ -2.34
SOX3P41225 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.45□□□□□ -2.34
SOX3P41225 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
SOX3P41225 RNU6-363P-201ENST00000362895 105 ntBASIC0.44□□□□□ -2.34
SOX3P41225 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
SOX3P41225 RNU4-67P-201ENST00000364569 141 ntBASIC0.44□□□□□ -2.34
SOX3P41225 RNA5SP517-201ENST00000364724 117 ntBASIC0.44□□□□□ -2.34
SOX3P41225 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
SOX3P41225 SNORA7.5-201ENST00000410672 110 ntBASIC0.44□□□□□ -2.34
SOX3P41225 TMSB4XP3-201ENST00000445144 114 ntBASIC0.44□□□□□ -2.34
SOX3P41225 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
SOX3P41225 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
SOX3P41225 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.44□□□□□ -2.34
SOX3P41225 Y_RNA.36-201ENST00000362602 112 ntBASIC0.43□□□□□ -2.34
SOX3P41225 SNORD114-26-201ENST00000363543 72 ntBASIC0.43□□□□□ -2.34
SOX3P41225 Y_RNA.346-201ENST00000365385 112 ntBASIC0.43□□□□□ -2.34
SOX3P41225 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
SOX3P41225 RNU6-429P-201ENST00000384582 108 ntBASIC0.43□□□□□ -2.34
SOX3P41225 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
SOX3P41225 Y_RNA.649-201ENST00000459077 103 ntBASIC0.43□□□□□ -2.34
SOX3P41225 AC007012.1-201ENST00000567192 175 ntBASIC0.43□□□□□ -2.34
SOX3P41225 MIR3613-201ENST00000579844 87 ntBASIC0.43□□□□□ -2.34
SOX3P41225 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
SOX3P41225 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
SOX3P41225 AP001362.1-201ENST00000625165 124 ntBASIC0.43□□□□□ -2.34
SOX3P41225 Y_RNA.98-201ENST00000363109 102 ntBASIC0.42□□□□□ -2.34
SOX3P41225 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
SOX3P41225 Y_RNA.563-201ENST00000384707 108 ntBASIC0.42□□□□□ -2.34
SOX3P41225 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
SOX3P41225 RNU6-135P-201ENST00000516769 101 ntBASIC0.42□□□□□ -2.34
SOX3P41225 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
SOX3P41225 RNY4P6-201ENST00000363667 96 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNU6-865P-201ENST00000364772 107 ntBASIC0.41□□□□□ -2.34
SOX3P41225 SNORD113-1-201ENST00000365321 69 ntBASIC0.41□□□□□ -2.34
SOX3P41225 MIR216A-201ENST00000385063 110 ntBASIC0.41□□□□□ -2.34
SOX3P41225 MIR759-201ENST00000390224 91 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNU6-816P-201ENST00000390914 107 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNU6-1268P-201ENST00000391214 107 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNU6-1239P-201ENST00000391310 107 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNU7-106P-201ENST00000459514 67 ntBASIC0.41□□□□□ -2.34
SOX3P41225 RNA5SP480-201ENST00000516840 109 ntBASIC0.41□□□□□ -2.34
SOX3P41225 AL162726.3-218ENST00000636401 95 ntBASIC0.41□□□□□ -2.34
SOX3P41225 MIR101-2-201ENST00000362195 79 ntBASIC0.4□□□□□ -2.35
SOX3P41225 RNU6-1313P-201ENST00000362622 102 ntBASIC0.4□□□□□ -2.35
SOX3P41225 Y_RNA.56-201ENST00000362798 112 ntBASIC0.4□□□□□ -2.35
SOX3P41225 Y_RNA.85-201ENST00000363014 111 ntBASIC0.4□□□□□ -2.35
SOX3P41225 RNU6-1201P-201ENST00000384227 107 ntBASIC0.4□□□□□ -2.35
SOX3P41225 RNU6-22P-201ENST00000384355 107 ntBASIC0.4□□□□□ -2.35
SOX3P41225 SNORD28-201ENST00000384706 75 ntBASIC0.4□□□□□ -2.35
SOX3P41225 Y_RNA.567-201ENST00000384736 106 ntBASIC0.4□□□□□ -2.35
SOX3P41225 MIR577-201ENST00000385196 96 ntBASIC0.4□□□□□ -2.35
SOX3P41225 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
SOX3P41225 SNRPGP12-201ENST00000449481 213 ntBASIC0.4□□□□□ -2.35
SOX3P41225 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
SOX3P41225 MIR4679-2-201ENST00000578358 77 ntBASIC0.4□□□□□ -2.35
SOX3P41225 SNORA25.18-201ENST00000607153 114 ntBASIC0.4□□□□□ -2.35
SOX3P41225 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms