Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 SNORA51.5-201ENST00000384126 131 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU6-1201P-201ENST00000384227 107 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 SNORA72.6-201ENST00000384520 129 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 MIR577-201ENST00000385196 96 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.85□□□□□ -2.27
TIMP3P35625 RNU6-977P-201ENST00000516411 103 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU7-156P-201ENST00000517214 74 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 AC141557.1-201ENST00000540982 400 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 MIR151B-201ENST00000584249 96 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 AL442128.1-201ENST00000615151 90 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TIMP3P35625 MIR450A1-201ENST00000362262 91 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 Y_RNA.78-201ENST00000362970 110 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TIMP3P35625 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 SNORD38.2-201ENST00000384470 69 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
TIMP3P35625 Y_RNA.588-201ENST00000391254 102 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 MIR1827-201ENST00000408549 66 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 SNORA25.16-201ENST00000516741 121 ntBASIC0.84□□□□□ -2.27
TIMP3P35625 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
TIMP3P35625 Y_RNA.10-201ENST00000362371 110 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 RNU4-58P-201ENST00000363192 141 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 RNU6-153P-201ENST00000364422 104 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 Y_RNA.377-201ENST00000365644 108 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 SNORD89-201ENST00000390981 114 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 MIR4500-201ENST00000579472 76 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 MIR4804-201ENST00000581683 73 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 AC096720.1-201ENST00000604441 183 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 AL136317.1-201ENST00000612653 226 ntBASIC0.83□□□□□ -2.28
TIMP3P35625 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.83□□□□□ -2.28
TIMP3P35625 Y_RNA.13-201ENST00000362403 112 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RNU6-766P-201ENST00000362478 107 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 SNORD38.1-201ENST00000363863 68 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RNU6-147P-201ENST00000383983 107 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 MIR520F-201ENST00000384824 87 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 SNORA19.1-201ENST00000410656 129 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RNU6-904P-201ENST00000516206 101 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RNU6-531P-201ENST00000516694 104 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 RNU6-1006P-201ENST00000516998 103 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 MIR6082-201ENST00000613604 109 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
TIMP3P35625 Y_RNA.247-201ENST00000364500 92 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MIR590-201ENST00000385008 97 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 RNU1-119P-201ENST00000391122 165 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 Y_RNA.601-201ENST00000410500 113 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
TIMP3P35625 RNU7-56P-201ENST00000458744 62 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 Y_RNA.659-201ENST00000515994 113 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MTND5P40-201ENST00000559945 246 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MIR3613-201ENST00000579844 87 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 SNORD92-201ENST00000585078 85 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MIR8066-201ENST00000617280 78 ntBASIC0.81□□□□□ -2.28
TIMP3P35625 MTATP6P29-201ENST00000415057 132 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 SPINT5P-201ENST00000448174 155 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 SCARNA23-201ENST00000516060 130 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 RNU6-90P-201ENST00000606352 106 ntBASIC0.8□□□□□ -2.28
TIMP3P35625 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TIMP3P35625 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 Y_RNA.42-201ENST00000362660 108 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 SNORD45B-201ENST00000364617 72 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-32P-201ENST00000383948 107 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-13P-201ENST00000384248 107 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-12P-201ENST00000384604 107 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-41P-201ENST00000384741 107 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 MIR548G-201ENST00000408442 89 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-1194P-201ENST00000516208 104 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 RNU6-765P-201ENST00000516916 99 ntBASIC0.79□□□□□ -2.28
TIMP3P35625 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TIMP3P35625 MIR101-2-201ENST00000362195 79 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 Y_RNA.544-201ENST00000384650 113 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 MIR520H-201ENST00000385126 88 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 RNU6-109P-201ENST00000516364 107 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 RNU6-184P-201ENST00000516514 107 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 RNU6-537P-201ENST00000517277 103 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 AC008608.1-201ENST00000603910 127 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 Y_RNA.818-201ENST00000618813 71 ntBASIC0.78□□□□□ -2.28
TIMP3P35625 Y_RNA.495-201ENST00000384435 112 ntBASIC0.77□□□□□ -2.29
TIMP3P35625 SNORD105-201ENST00000386910 85 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 254.4 ms