Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORD114-15-201ENST00000364687 72 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 MIR4744-201ENST00000581563 82 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 RNU6-86P-201ENST00000606534 107 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 MIR376B-201ENST00000614515 100 ntBASIC-1.2□□□□□ -2.6
RPA3P35244 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 MIR516A2-201ENST00000384888 90 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 MIR516A1-201ENST00000385033 90 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 RNU6-240P-201ENST00000516098 97 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 RNU6-850P-201ENST00000516934 103 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 AC021443.1-201ENST00000604478 211 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 MIR6851-201ENST00000617060 67 ntBASIC-1.21□□□□□ -2.6
RPA3P35244 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 SNORD77B-201ENST00000391112 67 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 AC113618.1-201ENST00000416747 285 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 AC244090.1-201ENST00000441884 93 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 snoU13.13-201ENST00000458842 104 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 RNU7-164P-201ENST00000459221 62 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.22□□□□□ -2.6
RPA3P35244 MIR369-201ENST00000362155 70 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNY4P3-201ENST00000365254 95 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNU6-472P-201ENST00000384299 107 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 MIR652-201ENST00000385278 98 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNU6-578P-201ENST00000390980 103 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNU7-123P-201ENST00000515911 60 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 AC138907.4-201ENST00000570107 226 ntBASIC-1.23□□□□□ -2.61
RPA3P35244 MIR196A1-201ENST00000388006 70 ntBASIC-1.24□□□□□ -2.61
RPA3P35244 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.24□□□□□ -2.61
RPA3P35244 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 RNU6-138P-201ENST00000515952 107 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 RNU6-881P-201ENST00000516813 102 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 MIR3681-201ENST00000580089 72 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 MIR4282-201ENST00000583613 67 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 AC087741.2-201ENST00000619415 172 ntBASIC-1.25□□□□□ -2.61
RPA3P35244 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 RNU6-643P-201ENST00000384018 107 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 RNU6-616P-201ENST00000384353 107 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.26□□□□□ -2.61
RPA3P35244 IGKV1-22-201ENST00000524313 326 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 AP001328.1-201ENST00000528550 176 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 U2.14-201ENST00000615943 113 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 U4.1-201ENST00000620349 87 ntBASIC-1.26□□□□□ -2.61
RPA3P35244 SNORD115-35-201ENST00000365122 82 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 SNORA49-201ENST00000386157 136 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 RNU7-55P-201ENST00000459426 62 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 RNA5SP476-201ENST00000516613 103 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 AC007012.1-201ENST00000567192 175 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 MIR548AX-201ENST00000580117 73 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 AC145423.2-201ENST00000610631 239 ntBASIC-1.27□□□□□ -2.61
RPA3P35244 SNORD115-25-201ENST00000362619 82 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 SNORA13-201ENST00000458790 133 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 RNU6-875P-201ENST00000516488 106 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 TRDV1-202ENST00000621643 102 ntBASIC-1.28□□□□□ -2.61
RPA3P35244 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 MIR34C-201ENST00000384831 77 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 SNORD83B-201ENST00000386745 93 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 AL161932.1-201ENST00000437408 146 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 U6.100-201ENST00000636230 99 ntBASIC-1.29□□□□□ -2.62
RPA3P35244 MTND5P18-201ENST00000445624 1801 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 RNU4-40P-201ENST00000364351 143 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 SNORD42.2-201ENST00000365570 69 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 RNU6-721P-201ENST00000410155 105 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 AC113195.1-201ENST00000579952 141 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.3□□□□□ -2.62
RPA3P35244 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.3□□□□□ -2.62
RPA3P35244 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 RBMX2P4-201ENST00000441256 376 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 snoU13.19-201ENST00000459148 104 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 MIR3179-1-201ENST00000578940 84 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 MIR3179-2-201ENST00000579107 84 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 MIR3179-3-201ENST00000579566 84 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 MIR3179-4-201ENST00000617599 84 ntBASIC-1.31□□□□□ -2.62
RPA3P35244 RNU4-36P-201ENST00000364294 144 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 2143.8 ms