Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC027119.1-201ENST00000440877 241 ntBASIC2.17□□□□□ -2.06
RXRBP28702 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
RXRBP28702 AC145423.2-201ENST00000610631 239 ntBASIC2.17□□□□□ -2.06
RXRBP28702 AL773524.1-201ENST00000614065 229 ntBASIC2.17□□□□□ -2.06
RXRBP28702 MIR6740-201ENST00000618268 113 ntBASIC2.17□□□□□ -2.06
RXRBP28702 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RXRBP28702 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RXRBP28702 RNU6-315P-201ENST00000362666 107 ntBASIC2.16□□□□□ -2.06
RXRBP28702 Y_RNA.168-201ENST00000363740 102 ntBASIC2.16□□□□□ -2.06
RXRBP28702 SNORD111.1-201ENST00000516421 86 ntBASIC2.16□□□□□ -2.06
RXRBP28702 AL096861.1-201ENST00000610899 123 ntBASIC2.16□□□□□ -2.06
RXRBP28702 MIR6078-201ENST00000611069 100 ntBASIC2.16□□□□□ -2.06
RXRBP28702 MIR8066-201ENST00000617280 78 ntBASIC2.16□□□□□ -2.06
RXRBP28702 uc_338.20-201ENST00000621563 178 ntBASIC2.16□□□□□ -2.06
RXRBP28702 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
RXRBP28702 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.06
RXRBP28702 MIR30D-201ENST00000362283 70 ntBASIC2.15□□□□□ -2.07
RXRBP28702 Y_RNA.565-201ENST00000384719 101 ntBASIC2.15□□□□□ -2.07
RXRBP28702 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
RXRBP28702 RNU6-850P-201ENST00000516934 103 ntBASIC2.15□□□□□ -2.07
RXRBP28702 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RXRBP28702 SNORD115-37-201ENST00000363768 82 ntBASIC2.14□□□□□ -2.07
RXRBP28702 RNA5SP48-201ENST00000363969 126 ntBASIC2.14□□□□□ -2.07
RXRBP28702 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
RXRBP28702 MIR588-201ENST00000384900 83 ntBASIC2.14□□□□□ -2.07
RXRBP28702 MIR1236-201ENST00000408340 102 ntBASIC2.14□□□□□ -2.07
RXRBP28702 AC244636.1-201ENST00000421152 228 ntBASIC2.14□□□□□ -2.07
RXRBP28702 AL450471.1-201ENST00000447509 127 ntBASIC2.14□□□□□ -2.07
RXRBP28702 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
RXRBP28702 RNU6-523P-201ENST00000516304 54 ntBASIC2.14□□□□□ -2.07
RXRBP28702 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
RXRBP28702 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
RXRBP28702 AP000753.3-201ENST00000604083 169 ntBASIC2.14□□□□□ -2.07
RXRBP28702 uc_338.6-201ENST00000613544 171 ntBASIC2.14□□□□□ -2.07
RXRBP28702 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
RXRBP28702 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RXRBP28702 Y_RNA.57-201ENST00000362806 113 ntBASIC2.13□□□□□ -2.07
RXRBP28702 RNU4-32P-201ENST00000363404 141 ntBASIC2.13□□□□□ -2.07
RXRBP28702 RNU6-129P-201ENST00000391022 107 ntBASIC2.13□□□□□ -2.07
RXRBP28702 SUMO2P12-201ENST00000405924 140 ntBASIC2.13□□□□□ -2.07
RXRBP28702 MIR548J-201ENST00000408833 112 ntBASIC2.13□□□□□ -2.07
RXRBP28702 RNU6-322P-201ENST00000516010 103 ntBASIC2.13□□□□□ -2.07
RXRBP28702 RNA5SP61-201ENST00000516453 100 ntBASIC2.13□□□□□ -2.07
RXRBP28702 MIR4500-201ENST00000579472 76 ntBASIC2.13□□□□□ -2.07
RXRBP28702 Y_RNA.788-201ENST00000622394 112 ntBASIC2.13□□□□□ -2.07
RXRBP28702 AC008163.1-202ENST00000636004 2889 ntBASIC2.12□□□□□ -2.07
RXRBP28702 RNU6-439P-201ENST00000384188 106 ntBASIC2.12□□□□□ -2.07
RXRBP28702 MIR517C-201ENST00000385103 95 ntBASIC2.12□□□□□ -2.07
RXRBP28702 Y_RNA.648-201ENST00000459455 110 ntBASIC2.12□□□□□ -2.07
RXRBP28702 AC004223.1-201ENST00000479840 271 ntBASIC2.12□□□□□ -2.07
RXRBP28702 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RXRBP28702 U6.109-201ENST00000636749 87 ntBASIC2.12□□□□□ -2.07
RXRBP28702 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
RXRBP28702 Y_RNA.68-201ENST00000362881 102 ntBASIC2.11□□□□□ -2.07
RXRBP28702 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
RXRBP28702 RNU6-788P-201ENST00000390967 104 ntBASIC2.11□□□□□ -2.07
RXRBP28702 BX276092.1-201ENST00000427368 251 ntBASIC2.11□□□□□ -2.07
RXRBP28702 AP003716.2-201ENST00000528260 108 ntBASIC2.11□□□□□ -2.07
RXRBP28702 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
RXRBP28702 Y_RNA.119-201ENST00000363301 96 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RNA5SP259-201ENST00000365541 109 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RNU6-571P-201ENST00000384128 107 ntBASIC2.1□□□□□ -2.07
RXRBP28702 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
RXRBP28702 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RNA5SP436-201ENST00000516020 115 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RNU6-922P-201ENST00000516753 99 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.1□□□□□ -2.07
RXRBP28702 SNORA31.24-201ENST00000517232 57 ntBASIC2.1□□□□□ -2.07
RXRBP28702 RN7SL793P-201ENST00000583259 296 ntBASIC2.1□□□□□ -2.07
RXRBP28702 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
RXRBP28702 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RXRBP28702 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
RXRBP28702 SNORD36A-201ENST00000362874 73 ntBASIC2.09□□□□□ -2.07
RXRBP28702 SNORA25.3-201ENST00000363205 127 ntBASIC2.09□□□□□ -2.07
RXRBP28702 snoU13.11-201ENST00000459219 104 ntBASIC2.09□□□□□ -2.07
RXRBP28702 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
RXRBP28702 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
RXRBP28702 U7.4-201ENST00000614961 63 ntBASIC2.09□□□□□ -2.07
RXRBP28702 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.09□□□□□ -2.07
RXRBP28702 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RXRBP28702 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
RXRBP28702 RNA5SP292-201ENST00000390974 118 ntBASIC2.08□□□□□ -2.08
RXRBP28702 RNU6-75P-201ENST00000515944 104 ntBASIC2.08□□□□□ -2.08
RXRBP28702 RNU6-557P-201ENST00000516842 110 ntBASIC2.08□□□□□ -2.08
RXRBP28702 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
RXRBP28702 SNORA77B-201ENST00000578179 125 ntBASIC2.08□□□□□ -2.08
RXRBP28702 MIRLET7A1-201ENST00000362295 80 ntBASIC2.07□□□□□ -2.08
RXRBP28702 RNU6-1165P-201ENST00000410119 107 ntBASIC2.07□□□□□ -2.08
RXRBP28702 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
RXRBP28702 MIR4264-201ENST00000583520 66 ntBASIC2.07□□□□□ -2.08
RXRBP28702 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
RXRBP28702 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RXRBP28702 SNORA63.2-201ENST00000362603 126 ntBASIC2.06□□□□□ -2.08
RXRBP28702 RNU6-396P-201ENST00000365369 105 ntBASIC2.06□□□□□ -2.08
RXRBP28702 Y_RNA.433-201ENST00000384089 102 ntBASIC2.06□□□□□ -2.08
RXRBP28702 MIR516A2-201ENST00000384888 90 ntBASIC2.06□□□□□ -2.08
RXRBP28702 MIR516A1-201ENST00000385033 90 ntBASIC2.06□□□□□ -2.08
RXRBP28702 RNU6-205P-201ENST00000390858 107 ntBASIC2.06□□□□□ -2.08
RXRBP28702 MIR1323-201ENST00000408090 73 ntBASIC2.06□□□□□ -2.08
RXRBP28702 AL354695.1-201ENST00000427935 228 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms