Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RNU6-429P-201ENST00000384582 108 ntBASIC0.68□□□□□ -2.3
CTPS1P17812 RNU6-291P-201ENST00000384720 107 ntBASIC0.68□□□□□ -2.3
CTPS1P17812 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
CTPS1P17812 AL670379.3-201ENST00000605040 251 ntBASIC0.68□□□□□ -2.3
CTPS1P17812 AL365222.1-201ENST00000614661 98 ntBASIC0.68□□□□□ -2.3
CTPS1P17812 Y_RNA.32-201ENST00000362589 110 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 RNU6-363P-201ENST00000362895 105 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 Y_RNA.507-201ENST00000384500 99 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 SNORA7.5-201ENST00000410672 110 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 RNU4-61P-201ENST00000411243 107 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 RNU6-62P-201ENST00000516526 102 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 AC007012.1-201ENST00000567192 175 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 MIR4500-201ENST00000579472 76 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
CTPS1P17812 Y_RNA.353-201ENST00000365440 108 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 Y_RNA.563-201ENST00000384707 108 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 MIR34C-201ENST00000384831 77 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 MIR548A1-201ENST00000385041 97 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 RNU6-469P-201ENST00000516253 101 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 MIR4679-2-201ENST00000578358 77 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.66□□□□□ -2.3
CTPS1P17812 uc_338.16-201ENST00000621804 95 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 AL035470.1-201ENST00000622571 220 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 AL162726.3-218ENST00000636401 95 ntBASIC0.66□□□□□ -2.3
CTPS1P17812 Y_RNA.155-201ENST00000363632 101 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RNU6-22P-201ENST00000384355 107 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RNU6-816P-201ENST00000390914 107 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RNU6-1268P-201ENST00000391214 107 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RNU6-1239P-201ENST00000391310 107 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 MIR1912-201ENST00000410389 80 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RPL39P34-201ENST00000477141 156 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 SNORA31.14-201ENST00000516728 116 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 RNU6-789P-201ENST00000517105 102 ntBASIC0.65□□□□□ -2.31
CTPS1P17812 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.65□□□□□ -2.31
CTPS1P17812 Y_RNA.85-201ENST00000363014 111 ntBASIC0.64□□□□□ -2.31
CTPS1P17812 Y_RNA.360-201ENST00000365512 102 ntBASIC0.64□□□□□ -2.31
CTPS1P17812 RNU6-409P-201ENST00000384114 104 ntBASIC0.64□□□□□ -2.31
CTPS1P17812 Y_RNA.56-201ENST00000362798 112 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 SNORD113-1-201ENST00000365321 69 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 SNORD38.2-201ENST00000384470 69 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 MIR644A-201ENST00000385262 94 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 RNU6-1168P-201ENST00000390831 104 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
CTPS1P17812 MIR3678-201ENST00000578455 94 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 MIR548H5-201ENST00000580314 60 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 AL512310.12-203ENST00000640543 90 ntBASIC0.63□□□□□ -2.31
CTPS1P17812 RNU6-1313P-201ENST00000362622 102 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 SNORA63.5-201ENST00000363548 123 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 Y_RNA.309-201ENST00000365046 111 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 Y_RNA.549-201ENST00000384657 102 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU6-679P-201ENST00000391003 106 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 AL353813.1-201ENST00000440700 253 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU6-313P-201ENST00000516317 112 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU6-479P-201ENST00000516348 105 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU6-135P-201ENST00000516769 101 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
CTPS1P17812 RNA5SP205-201ENST00000364653 136 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 RNU6-880P-201ENST00000384526 107 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 MIR598-201ENST00000384868 97 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 RNU6-1154P-201ENST00000391001 104 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 BX276092.1-201ENST00000427368 251 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 RNU6-1018P-201ENST00000516577 106 ntBASIC0.61□□□□□ -2.31
CTPS1P17812 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
CTPS1P17812 RNU6-406P-201ENST00000516470 107 ntBASIC0.6□□□□□ -2.31
CTPS1P17812 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
CTPS1P17812 SNORD18A-201ENST00000363753 72 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 RNA5SP245-201ENST00000364239 121 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 RNU6-571P-201ENST00000384128 107 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 SNORD116-21-201ENST00000384507 92 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 MIR548I2-201ENST00000408348 149 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 RNU2-51P-201ENST00000410708 197 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 SNRPGP12-201ENST00000449481 213 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
CTPS1P17812 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CTPS1P17812 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CTPS1P17812 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CTPS1P17812 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 RNU6-1201P-201ENST00000384227 107 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 RNU6-476P-201ENST00000384726 107 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 Y_RNA.567-201ENST00000384736 106 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 MIR635-201ENST00000384830 98 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 AL606753.1-201ENST00000427435 87 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 RNU6-1006P-201ENST00000516998 103 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 AC068339.1-201ENST00000526965 141 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 MTND5P40-201ENST00000559945 246 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
CTPS1P17812 Y_RNA.49-201ENST00000362714 112 ntBASIC0.57□□□□□ -2.32
CTPS1P17812 SNORD38.1-201ENST00000363863 68 ntBASIC0.57□□□□□ -2.32
CTPS1P17812 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 310.1 ms