Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 MIR4694-201ENST00000578534 80 ntBASIC1.25□□□□□ -2.21
ATP2A2P16615 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ATP2A2P16615 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
ATP2A2P16615 RNU6-369P-201ENST00000362515 102 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 RNU4-58P-201ENST00000363192 141 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 Y_RNA.163-201ENST00000363702 113 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 RNU6-755P-201ENST00000364400 103 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 RNU6-1113P-201ENST00000384348 107 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ATP2A2P16615 Y_RNA.588-201ENST00000391254 102 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 MIR4804-201ENST00000581683 73 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 MIR376B-201ENST00000614515 100 ntBASIC1.24□□□□□ -2.21
ATP2A2P16615 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATP2A2P16615 RNY3P2-201ENST00000362918 102 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 RNU6-44P-201ENST00000384045 107 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 SNORA72.6-201ENST00000384520 129 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 RNU6-1194P-201ENST00000516208 104 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 SNORD92-201ENST00000585078 85 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 AC096720.1-201ENST00000604441 183 ntBASIC1.23□□□□□ -2.21
ATP2A2P16615 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 Y_RNA.78-201ENST00000362970 110 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RNU4-36P-201ENST00000364294 144 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 Y_RNA.377-201ENST00000365644 108 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RNU6-1201P-201ENST00000384227 107 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RNU6-106P-201ENST00000384405 107 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 MIR34C-201ENST00000384831 77 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RNU1-119P-201ENST00000391122 165 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 AL353813.1-201ENST00000440700 253 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 AC141557.1-201ENST00000540982 400 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 MIR6082-201ENST00000613604 109 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 AL442128.1-201ENST00000615151 90 ntBASIC1.22□□□□□ -2.21
ATP2A2P16615 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ATP2A2P16615 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
ATP2A2P16615 MIR577-201ENST00000385196 96 ntBASIC1.21□□□□□ -2.22
ATP2A2P16615 RNU6-832P-201ENST00000363319 107 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 RNU6-1099P-201ENST00000363533 107 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 SNORD38.1-201ENST00000363863 68 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 RNU6-554P-201ENST00000410466 106 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 AL031737.1-201ENST00000450125 223 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 RNU7-56P-201ENST00000458744 62 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 PDCD5P2-201ENST00000507570 312 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 SNORA25.16-201ENST00000516741 121 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 MIR5000-201ENST00000577717 103 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 uc_338.28-201ENST00000612082 187 ntBASIC1.2□□□□□ -2.22
ATP2A2P16615 Y_RNA.13-201ENST00000362403 112 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 Y_RNA.42-201ENST00000362660 108 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 Y_RNA.81-201ENST00000362997 102 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 AC004941.2-201ENST00000427009 228 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 MIR4500-201ENST00000579472 76 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
ATP2A2P16615 MIR8066-201ENST00000617280 78 ntBASIC1.19□□□□□ -2.22
ATP2A2P16615 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
ATP2A2P16615 SNORD105-201ENST00000386910 85 ntBASIC1.18□□□□□ -2.22
ATP2A2P16615 RNU7-102P-201ENST00000458948 62 ntBASIC1.18□□□□□ -2.22
ATP2A2P16615 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
ATP2A2P16615 RNU6-531P-201ENST00000516694 104 ntBASIC1.18□□□□□ -2.22
ATP2A2P16615 RN7SL793P-201ENST00000583259 296 ntBASIC1.18□□□□□ -2.22
ATP2A2P16615 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 MIR373-201ENST00000362273 69 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 SNORA63.4-201ENST00000362763 126 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 SNORA51.5-201ENST00000384126 131 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 RNU6-1006P-201ENST00000516998 103 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 AP003327.1-201ENST00000529684 127 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 AC090897.1-201ENST00000580909 226 ntBASIC1.17□□□□□ -2.22
ATP2A2P16615 MIR101-2-201ENST00000362195 79 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 Y_RNA.374-201ENST00000365606 101 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 RNU6-756P-201ENST00000383997 107 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 RNY1P4-201ENST00000384595 115 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 MTND5P40-201ENST00000559945 246 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 RNU6-90P-201ENST00000606352 106 ntBASIC1.16□□□□□ -2.22
ATP2A2P16615 RNU6-766P-201ENST00000362478 107 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 SNORD45B-201ENST00000364617 72 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 MIR216A-201ENST00000385063 110 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 MIR520H-201ENST00000385126 88 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 Y_RNA.601-201ENST00000410500 113 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 RNU6-904P-201ENST00000516206 101 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
ATP2A2P16615 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.15□□□□□ -2.23
ATP2A2P16615 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
ATP2A2P16615 SPINT5P-201ENST00000448174 155 ntBASIC1.14□□□□□ -2.23
ATP2A2P16615 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
ATP2A2P16615 RNU7-10P-201ENST00000607194 63 ntBASIC1.14□□□□□ -2.23
ATP2A2P16615 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ATP2A2P16615 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 Y_RNA.659-201ENST00000515994 113 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 RNU6-448P-201ENST00000517052 107 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 CYP3A137P-201ENST00000562436 69 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 MIR4439-201ENST00000583746 80 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.13□□□□□ -2.23
ATP2A2P16615 Y_RNA.818-201ENST00000618813 71 ntBASIC1.13□□□□□ -2.23
ATP2A2P16615 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ATP2A2P16615 Y_RNA.247-201ENST00000364500 92 ntBASIC1.12□□□□□ -2.23
ATP2A2P16615 SCARNA23-201ENST00000516060 130 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms