Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.08□□□□□ -2.08
NID1P14543 AC013244.2-201ENST00000603396 103 ntBASIC2.08□□□□□ -2.08
NID1P14543 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NID1P14543 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU6-1260P-201ENST00000362944 107 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU6-654P-201ENST00000364373 107 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU6-580P-201ENST00000365159 107 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU6-291P-201ENST00000384720 107 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNA5SP95-201ENST00000410319 137 ntBASIC2.07□□□□□ -2.08
NID1P14543 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NID1P14543 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU7-156P-201ENST00000517214 74 ntBASIC2.07□□□□□ -2.08
NID1P14543 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
NID1P14543 AP003716.2-201ENST00000528260 108 ntBASIC2.07□□□□□ -2.08
NID1P14543 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NID1P14543 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NID1P14543 RNU6-664P-201ENST00000362381 107 ntBASIC2.06□□□□□ -2.08
NID1P14543 Y_RNA.56-201ENST00000362798 112 ntBASIC2.06□□□□□ -2.08
NID1P14543 RNA5SP264-201ENST00000363115 107 ntBASIC2.06□□□□□ -2.08
NID1P14543 SNORD101-201ENST00000384027 73 ntBASIC2.06□□□□□ -2.08
NID1P14543 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
NID1P14543 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
NID1P14543 AL606490.4-201ENST00000423117 127 ntBASIC2.06□□□□□ -2.08
NID1P14543 AC093423.1-201ENST00000440817 142 ntBASIC2.06□□□□□ -2.08
NID1P14543 AC015688.6-201ENST00000577737 104 ntBASIC2.06□□□□□ -2.08
NID1P14543 ZNF209P-201ENST00000593450 2304 ntBASIC2.06□□□□□ -2.08
NID1P14543 MIR4696-201ENST00000581431 70 ntBASIC2.05□□□□□ -2.08
NID1P14543 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.05□□□□□ -2.08
NID1P14543 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
NID1P14543 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
NID1P14543 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NID1P14543 MIR1257-201ENST00000408490 117 ntBASIC2.04□□□□□ -2.08
NID1P14543 AC092628.1-201ENST00000436250 252 ntBASIC2.04□□□□□ -2.08
NID1P14543 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
NID1P14543 Y_RNA.676-201ENST00000516393 96 ntBASIC2.04□□□□□ -2.08
NID1P14543 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.04□□□□□ -2.08
NID1P14543 AC023934.1-201ENST00000574529 2389 ntBASIC2.04□□□□□ -2.08
NID1P14543 MIR3675-201ENST00000583661 73 ntBASIC2.04□□□□□ -2.08
NID1P14543 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.04□□□□□ -2.08
NID1P14543 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.04□□□□□ -2.08
NID1P14543 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
NID1P14543 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
NID1P14543 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
NID1P14543 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NID1P14543 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
NID1P14543 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.03□□□□□ -2.08
NID1P14543 AL356320.1-201ENST00000429616 163 ntBASIC2.03□□□□□ -2.08
NID1P14543 RNU7-185P-201ENST00000459215 60 ntBASIC2.03□□□□□ -2.08
NID1P14543 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
NID1P14543 MIR3140-201ENST00000583685 90 ntBASIC2.03□□□□□ -2.08
NID1P14543 MIR6082-201ENST00000613604 109 ntBASIC2.03□□□□□ -2.08
NID1P14543 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
NID1P14543 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.03□□□□□ -2.08
NID1P14543 U6.100-201ENST00000636230 99 ntBASIC2.03□□□□□ -2.08
NID1P14543 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
NID1P14543 Y_RNA.13-201ENST00000362403 112 ntBASIC2.02□□□□□ -2.09
NID1P14543 RNU6-895P-201ENST00000384125 103 ntBASIC2.02□□□□□ -2.09
NID1P14543 Y_RNA.606-201ENST00000410579 103 ntBASIC2.02□□□□□ -2.09
NID1P14543 AL603825.1-201ENST00000438481 80 ntBASIC2.02□□□□□ -2.09
NID1P14543 AC097635.1-201ENST00000450678 155 ntBASIC2.02□□□□□ -2.09
NID1P14543 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
NID1P14543 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
NID1P14543 Y_RNA.697-201ENST00000516776 113 ntBASIC2.02□□□□□ -2.09
NID1P14543 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
NID1P14543 AC005520.4-201ENST00000604337 90 ntBASIC2.02□□□□□ -2.09
NID1P14543 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
NID1P14543 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
NID1P14543 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NID1P14543 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NID1P14543 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
NID1P14543 RNU6-1054P-201ENST00000411293 104 ntBASIC2.01□□□□□ -2.09
NID1P14543 AC097510.1-201ENST00000510945 133 ntBASIC2.01□□□□□ -2.09
NID1P14543 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
NID1P14543 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
NID1P14543 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
NID1P14543 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
NID1P14543 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NID1P14543 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
NID1P14543 RNU6-935P-201ENST00000410371 100 ntBASIC2□□□□□ -2.09
NID1P14543 RNU6-765P-201ENST00000516916 99 ntBASIC2□□□□□ -2.09
NID1P14543 MTRNR2L2-201ENST00000604882 87 ntBASIC2□□□□□ -2.09
NID1P14543 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
NID1P14543 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NID1P14543 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
NID1P14543 RNU6-630P-201ENST00000391258 106 ntBASIC1.99□□□□□ -2.09
NID1P14543 AC244636.1-201ENST00000421152 228 ntBASIC1.99□□□□□ -2.09
NID1P14543 MIR8053-201ENST00000613344 75 ntBASIC1.99□□□□□ -2.09
NID1P14543 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
NID1P14543 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
NID1P14543 RNA5SP458-201ENST00000516188 119 ntBASIC1.98□□□□□ -2.09
NID1P14543 U6.81-201ENST00000612550 106 ntBASIC1.98□□□□□ -2.09
NID1P14543 SNORA25.4-201ENST00000363666 124 ntBASIC1.97□□□□□ -2.09
NID1P14543 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
NID1P14543 SNORA24B-201ENST00000384176 131 ntBASIC1.97□□□□□ -2.09
NID1P14543 SNORD45A-201ENST00000384512 84 ntBASIC1.97□□□□□ -2.09
NID1P14543 MIR599-201ENST00000385069 95 ntBASIC1.97□□□□□ -2.09
NID1P14543 MTND4LP19-201ENST00000403051 166 ntBASIC1.97□□□□□ -2.09
NID1P14543 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.97□□□□□ -2.09
NID1P14543 AC138907.6-201ENST00000568401 126 ntBASIC1.97□□□□□ -2.09
NID1P14543 AC138869.1-201ENST00000568623 124 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms