Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXD8P13378 RNU6-654P-201ENST00000364373 107 ntBASIC2.07□□□□□ -2.08
HOXD8P13378 RNU6-686P-201ENST00000364839 107 ntBASIC2.07□□□□□ -2.08
HOXD8P13378 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
HOXD8P13378 AC079140.2-201ENST00000506193 142 ntBASIC2.07□□□□□ -2.08
HOXD8P13378 RNU6-531P-201ENST00000516694 104 ntBASIC2.07□□□□□ -2.08
HOXD8P13378 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXD8P13378 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HOXD8P13378 RNU6-411P-201ENST00000384451 107 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 MIR1185-1-201ENST00000408598 86 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 FGF7P7-201ENST00000514120 227 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 SNORA25.16-201ENST00000516741 121 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 MIR4536-1-201ENST00000583537 88 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 uc_338.6-201ENST00000613544 171 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
HOXD8P13378 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HOXD8P13378 MIR377-201ENST00000362145 69 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 MIR101-2-201ENST00000362195 79 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 MIR516A2-201ENST00000384888 90 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 MIR516A1-201ENST00000385033 90 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 RNU6-466P-201ENST00000391224 103 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 RNU6-1254P-201ENST00000391266 104 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 AP1B1P2-201ENST00000416196 106 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 snoU13.25-201ENST00000458945 104 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 AC005908.1-201ENST00000468701 347 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 AC084768.2-201ENST00000622736 221 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 MIR1297-201ENST00000637311 77 ntBASIC2.05□□□□□ -2.08
HOXD8P13378 MIRLET7A1-201ENST00000362295 80 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 Y_RNA.264-201ENST00000364665 102 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 RNU6-811P-201ENST00000384069 107 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 RNU7-85P-201ENST00000458851 63 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 RNU6-807P-201ENST00000516805 107 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 AC023934.1-201ENST00000574529 2389 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 MIR4491-201ENST00000581087 68 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
HOXD8P13378 SNORD33-201ENST00000362761 85 ntBASIC2.03□□□□□ -2.08
HOXD8P13378 RNU6-478P-201ENST00000363904 110 ntBASIC2.03□□□□□ -2.08
HOXD8P13378 Y_RNA.330-201ENST00000365230 109 ntBASIC2.03□□□□□ -2.08
HOXD8P13378 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
HOXD8P13378 AC008163.1-202ENST00000636004 2889 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXD8P13378 SNORA63.2-201ENST00000362603 126 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 MIR1257-201ENST00000408490 117 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 MIR18B-201ENST00000454574 71 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 AC125388.1-201ENST00000459631 156 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXD8P13378 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 MIR4796-201ENST00000580742 81 ntBASIC2.02□□□□□ -2.09
HOXD8P13378 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXD8P13378 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXD8P13378 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
HOXD8P13378 RNU1-36P-201ENST00000365130 165 ntBASIC2.01□□□□□ -2.09
HOXD8P13378 RNU4-62P-201ENST00000410125 130 ntBASIC2.01□□□□□ -2.09
HOXD8P13378 RNU6-523P-201ENST00000516304 54 ntBASIC2.01□□□□□ -2.09
HOXD8P13378 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXD8P13378 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXD8P13378 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXD8P13378 SNORD1A-201ENST00000364968 72 ntBASIC2□□□□□ -2.09
HOXD8P13378 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
HOXD8P13378 MIR548U-201ENST00000390728 81 ntBASIC2□□□□□ -2.09
HOXD8P13378 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
HOXD8P13378 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
HOXD8P13378 AC004223.1-201ENST00000479840 271 ntBASIC2□□□□□ -2.09
HOXD8P13378 AP003716.2-201ENST00000528260 108 ntBASIC2□□□□□ -2.09
HOXD8P13378 MIR3664-201ENST00000579074 99 ntBASIC2□□□□□ -2.09
HOXD8P13378 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2□□□□□ -2.09
HOXD8P13378 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HOXD8P13378 SNORD63B-201ENST00000411005 70 ntBASIC1.99□□□□□ -2.09
HOXD8P13378 AL450471.1-201ENST00000447509 127 ntBASIC1.99□□□□□ -2.09
HOXD8P13378 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
HOXD8P13378 RNU6-1194P-201ENST00000516208 104 ntBASIC1.99□□□□□ -2.09
HOXD8P13378 Y_RNA.681-201ENST00000516445 113 ntBASIC1.99□□□□□ -2.09
HOXD8P13378 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HOXD8P13378 SNORD36A-201ENST00000362874 73 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 Y_RNA.283-201ENST00000364798 112 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HOXD8P13378 Y_RNA.588-201ENST00000391254 102 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 RNU7-10P-201ENST00000607194 63 ntBASIC1.98□□□□□ -2.09
HOXD8P13378 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HOXD8P13378 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 MIR635-201ENST00000384830 98 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 SNORA67.5-201ENST00000391036 107 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 SNORD83.1-201ENST00000411362 77 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 RNU7-185P-201ENST00000459215 60 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 SNORD92-201ENST00000585078 85 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 AL096840.1-201ENST00000603287 93 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
HOXD8P13378 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
HOXD8P13378 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HOXD8P13378 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HOXD8P13378 Y_RNA.224-201ENST00000364308 111 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms