Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 AC020891.4-201ENST00000605745 93 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 AC091304.10-201ENST00000641554 121 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 RNY1P2-201ENST00000364820 117 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 Y_RNA.588-201ENST00000391254 102 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 Y_RNA.601-201ENST00000410500 113 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 SCARNA23-201ENST00000516060 130 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 Y_RNA.677-201ENST00000516401 85 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 SNORA25.16-201ENST00000516741 121 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 AC090897.1-201ENST00000580909 226 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 AC022709.1-201ENST00000615967 87 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 MIR6734-201ENST00000621166 68 ntBASIC1.27□□□□□ -2.21
SNRPA1P09661 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SNRPA1P09661 Y_RNA.10-201ENST00000362371 110 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 SNORA72.6-201ENST00000384520 129 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 Y_RNA.544-201ENST00000384650 113 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SNRPA1P09661 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 RNU4-83P-201ENST00000410863 133 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 RPS26P5-201ENST00000418544 335 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 MIR548Z-201ENST00000584743 97 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 AC096720.1-201ENST00000604441 183 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 AC012531.4-201ENST00000616509 177 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 AP001318.4-201ENST00000616637 121 ntBASIC1.26□□□□□ -2.21
SNRPA1P09661 Y_RNA.119-201ENST00000363301 96 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 SNORD38.1-201ENST00000363863 68 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 Y_RNA.348-201ENST00000365403 103 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 MIR532-201ENST00000385025 91 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 MIR4500-201ENST00000579472 76 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 MIR151B-201ENST00000584249 96 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 Y_RNA.818-201ENST00000618813 71 ntBASIC1.25□□□□□ -2.21
SNRPA1P09661 RNU6-369P-201ENST00000362515 102 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 RNU6-170P-201ENST00000362832 104 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 Y_RNA.107-201ENST00000363190 121 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 RNU6-531P-201ENST00000516694 104 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 MIR3973-201ENST00000579824 107 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 MIR4676-201ENST00000583078 72 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 AC211469.2-201ENST00000605461 205 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 MIR6857-201ENST00000613267 93 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
SNRPA1P09661 SNORD45B-201ENST00000364617 72 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SNRPA1P09661 RNU6-905P-201ENST00000384434 107 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 SNORD38.2-201ENST00000384470 69 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 SPINT5P-201ENST00000448174 155 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 AC109327.2-201ENST00000448339 378 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 MTND5P40-201ENST00000559945 246 ntBASIC1.23□□□□□ -2.21
SNRPA1P09661 Y_RNA.13-201ENST00000362403 112 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 Y_RNA.95-201ENST00000363079 95 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 RNU6-640P-201ENST00000363693 105 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 Y_RNA.467-201ENST00000384297 102 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 MIR548G-201ENST00000408442 89 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 SNORA40.13-201ENST00000516379 120 ntBASIC1.22□□□□□ -2.21
SNRPA1P09661 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNRPA1P09661 BX276092.1-201ENST00000427368 251 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 MTATP8P2-201ENST00000435212 202 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 RNU7-156P-201ENST00000517214 74 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 MIR4777-201ENST00000583710 86 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 RNU6-90P-201ENST00000606352 106 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.21□□□□□ -2.22
SNRPA1P09661 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 Y_RNA.93-201ENST00000363066 109 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU6-1163P-201ENST00000364516 107 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU6-644P-201ENST00000391155 98 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 AC004941.2-201ENST00000427009 228 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU7-61P-201ENST00000515897 61 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
SNRPA1P09661 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
SNRPA1P09661 HSBP1P2-201ENST00000299671 229 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 RNU4-58P-201ENST00000363192 141 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 Y_RNA.466-201ENST00000384294 113 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 RNU6-364P-201ENST00000384387 107 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 MIR4804-201ENST00000581683 73 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 AC013244.2-201ENST00000603396 103 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 RNU6-86P-201ENST00000606534 107 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 MIR6082-201ENST00000613604 109 ntBASIC1.19□□□□□ -2.22
SNRPA1P09661 RNU6-1298P-201ENST00000362456 101 ntBASIC1.18□□□□□ -2.22
SNRPA1P09661 Y_RNA.567-201ENST00000384736 106 ntBASIC1.18□□□□□ -2.22
SNRPA1P09661 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
SNRPA1P09661 MIR938-201ENST00000401216 83 ntBASIC1.18□□□□□ -2.22
SNRPA1P09661 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.18□□□□□ -2.22
SNRPA1P09661 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.18□□□□□ -2.22
SNRPA1P09661 RNU6-158P-201ENST00000517104 100 ntBASIC1.18□□□□□ -2.22
SNRPA1P09661 Y_RNA.42-201ENST00000362660 108 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 MIR520F-201ENST00000384824 87 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 SNORD89-201ENST00000390981 114 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 RNY4P30-201ENST00000410216 95 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 RNU7-102P-201ENST00000458948 62 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms