Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-865P-201ENST00000364772 107 ntBASIC0.81□□□□□ -2.28
MMP3P08254 SNORD115-35-201ENST00000365122 82 ntBASIC0.81□□□□□ -2.28
MMP3P08254 SNORD113-1-201ENST00000365321 69 ntBASIC0.81□□□□□ -2.28
MMP3P08254 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
MMP3P08254 AC244098.3-201ENST00000424803 96 ntBASIC0.81□□□□□ -2.28
MMP3P08254 RNU6-313P-201ENST00000516317 112 ntBASIC0.81□□□□□ -2.28
MMP3P08254 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
MMP3P08254 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
MMP3P08254 MIR376B-201ENST00000614515 100 ntBASIC0.81□□□□□ -2.28
MMP3P08254 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
MMP3P08254 RNY1P8-201ENST00000383970 114 ntBASIC0.8□□□□□ -2.28
MMP3P08254 MIR34C-201ENST00000384831 77 ntBASIC0.8□□□□□ -2.28
MMP3P08254 MIR573-201ENST00000384964 99 ntBASIC0.8□□□□□ -2.28
MMP3P08254 RNU2-51P-201ENST00000410708 197 ntBASIC0.8□□□□□ -2.28
MMP3P08254 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.8□□□□□ -2.28
MMP3P08254 AC090897.1-201ENST00000580909 226 ntBASIC0.8□□□□□ -2.28
MMP3P08254 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
MMP3P08254 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.8□□□□□ -2.28
MMP3P08254 Y_RNA.155-201ENST00000363632 101 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNU4-67P-201ENST00000364569 141 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNA5SP205-201ENST00000364653 136 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNY1P2-201ENST00000364820 117 ntBASIC0.79□□□□□ -2.28
MMP3P08254 Y_RNA.328-201ENST00000365208 113 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNU6-816P-201ENST00000390914 107 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNU6-1268P-201ENST00000391214 107 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNU6-1239P-201ENST00000391310 107 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
MMP3P08254 AL353813.1-201ENST00000440700 253 ntBASIC0.79□□□□□ -2.28
MMP3P08254 RNU6-479P-201ENST00000516348 105 ntBASIC0.79□□□□□ -2.28
MMP3P08254 MIR6129-201ENST00000616087 109 ntBASIC0.79□□□□□ -2.28
MMP3P08254 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.79□□□□□ -2.28
MMP3P08254 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
MMP3P08254 Y_RNA.35-201ENST00000362601 101 ntBASIC0.78□□□□□ -2.28
MMP3P08254 SNORD114-23-201ENST00000363536 72 ntBASIC0.78□□□□□ -2.28
MMP3P08254 Y_RNA.563-201ENST00000384707 108 ntBASIC0.78□□□□□ -2.28
MMP3P08254 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
MMP3P08254 RNU6-1194P-201ENST00000516208 104 ntBASIC0.78□□□□□ -2.28
MMP3P08254 Y_RNA.697-201ENST00000516776 113 ntBASIC0.78□□□□□ -2.28
MMP3P08254 RNU6-448P-201ENST00000517052 107 ntBASIC0.78□□□□□ -2.28
MMP3P08254 MIR4500-201ENST00000579472 76 ntBASIC0.78□□□□□ -2.28
MMP3P08254 MIR3612-201ENST00000579753 87 ntBASIC0.78□□□□□ -2.28
MMP3P08254 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
MMP3P08254 Y_RNA.30-201ENST00000362572 97 ntBASIC0.77□□□□□ -2.29
MMP3P08254 RNU4-58P-201ENST00000363192 141 ntBASIC0.77□□□□□ -2.29
MMP3P08254 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
MMP3P08254 SNORD116-21-201ENST00000384507 92 ntBASIC0.77□□□□□ -2.29
MMP3P08254 RNU6-679P-201ENST00000391003 106 ntBASIC0.77□□□□□ -2.29
MMP3P08254 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.77□□□□□ -2.29
MMP3P08254 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
MMP3P08254 AP001362.1-201ENST00000625165 124 ntBASIC0.77□□□□□ -2.29
MMP3P08254 AL162726.3-218ENST00000636401 95 ntBASIC0.77□□□□□ -2.29
MMP3P08254 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
MMP3P08254 Y_RNA.32-201ENST00000362589 110 ntBASIC0.76□□□□□ -2.29
MMP3P08254 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
MMP3P08254 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
MMP3P08254 RNU6-291P-201ENST00000384720 107 ntBASIC0.76□□□□□ -2.29
MMP3P08254 RNU6-476P-201ENST00000384726 107 ntBASIC0.76□□□□□ -2.29
MMP3P08254 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
MMP3P08254 BX276092.1-201ENST00000427368 251 ntBASIC0.76□□□□□ -2.29
MMP3P08254 AC002350.1-201ENST00000490759 375 ntBASIC0.76□□□□□ -2.29
MMP3P08254 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
MMP3P08254 Y_RNA.247-201ENST00000364500 92 ntBASIC0.75□□□□□ -2.29
MMP3P08254 RNU6-409P-201ENST00000384114 104 ntBASIC0.75□□□□□ -2.29
MMP3P08254 RNU6-1144P-201ENST00000384247 104 ntBASIC0.75□□□□□ -2.29
MMP3P08254 Y_RNA.507-201ENST00000384500 99 ntBASIC0.75□□□□□ -2.29
MMP3P08254 RNU6-535P-201ENST00000384722 107 ntBASIC0.75□□□□□ -2.29
MMP3P08254 RNU6-1064P-201ENST00000410626 104 ntBASIC0.75□□□□□ -2.29
MMP3P08254 RNU6-765P-201ENST00000516916 99 ntBASIC0.75□□□□□ -2.29
MMP3P08254 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
MMP3P08254 AC010487.4-201ENST00000637027 61 ntBASIC0.75□□□□□ -2.29
MMP3P08254 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.75□□□□□ -2.29
MMP3P08254 AL512310.12-203ENST00000640543 90 ntBASIC0.75□□□□□ -2.29
MMP3P08254 SNORA36.2-201ENST00000384004 127 ntBASIC0.74□□□□□ -2.29
MMP3P08254 RNU6-880P-201ENST00000384526 107 ntBASIC0.74□□□□□ -2.29
MMP3P08254 RNU6-429P-201ENST00000384582 108 ntBASIC0.74□□□□□ -2.29
MMP3P08254 MIR101-2-201ENST00000362195 79 ntBASIC0.73□□□□□ -2.29
MMP3P08254 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
MMP3P08254 Y_RNA.85-201ENST00000363014 111 ntBASIC0.73□□□□□ -2.29
MMP3P08254 RNA5SP245-201ENST00000364239 121 ntBASIC0.73□□□□□ -2.29
MMP3P08254 Y_RNA.360-201ENST00000365512 102 ntBASIC0.73□□□□□ -2.29
MMP3P08254 Y_RNA.536-201ENST00000384621 113 ntBASIC0.73□□□□□ -2.29
MMP3P08254 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
MMP3P08254 SNORD100-201ENST00000408573 76 ntBASIC0.73□□□□□ -2.29
MMP3P08254 RNU6-733P-201ENST00000410759 104 ntBASIC0.73□□□□□ -2.29
MMP3P08254 SNORA31.14-201ENST00000516728 116 ntBASIC0.73□□□□□ -2.29
MMP3P08254 AC068339.1-201ENST00000526965 141 ntBASIC0.73□□□□□ -2.29
MMP3P08254 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
MMP3P08254 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
MMP3P08254 MIR4679-2-201ENST00000578358 77 ntBASIC0.73□□□□□ -2.29
MMP3P08254 MIR18A-201ENST00000362310 71 ntBASIC0.72□□□□□ -2.29
MMP3P08254 U8.6-201ENST00000364939 135 ntBASIC0.72□□□□□ -2.29
MMP3P08254 RNA5SP117-201ENST00000365294 118 ntBASIC0.72□□□□□ -2.29
MMP3P08254 RNA5SP193-201ENST00000410353 107 ntBASIC0.72□□□□□ -2.29
MMP3P08254 RPL39P34-201ENST00000477141 156 ntBASIC0.72□□□□□ -2.29
MMP3P08254 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.72□□□□□ -2.29
MMP3P08254 RNU6-1313P-201ENST00000362622 102 ntBASIC0.71□□□□□ -2.3
MMP3P08254 RNA5SP457-201ENST00000363657 124 ntBASIC0.71□□□□□ -2.3
MMP3P08254 Y_RNA.309-201ENST00000365046 111 ntBASIC0.71□□□□□ -2.3
MMP3P08254 RNU6-1056P-201ENST00000383996 107 ntBASIC0.71□□□□□ -2.3
MMP3P08254 MIR1912-201ENST00000410389 80 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms