Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 Y_RNA.371-201ENST00000365591 113 ntBASIC2.15□□□□□ -2.07
THBS1P07996 RNU6-895P-201ENST00000384125 103 ntBASIC2.15□□□□□ -2.07
THBS1P07996 SNORD90-201ENST00000391145 111 ntBASIC2.15□□□□□ -2.07
THBS1P07996 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.15□□□□□ -2.07
THBS1P07996 RNU7-156P-201ENST00000517214 74 ntBASIC2.15□□□□□ -2.07
THBS1P07996 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.15□□□□□ -2.07
THBS1P07996 AC013244.2-201ENST00000603396 103 ntBASIC2.15□□□□□ -2.07
THBS1P07996 MIR6082-201ENST00000613604 109 ntBASIC2.15□□□□□ -2.07
THBS1P07996 RNU6-935P-201ENST00000410371 100 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC092628.1-201ENST00000436250 252 ntBASIC2.14□□□□□ -2.07
THBS1P07996 snoU13.17-201ENST00000458802 104 ntBASIC2.14□□□□□ -2.07
THBS1P07996 RNU7-185P-201ENST00000459215 60 ntBASIC2.14□□□□□ -2.07
THBS1P07996 snoU13.15-201ENST00000459407 104 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC097510.1-201ENST00000510945 133 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC138907.6-201ENST00000568401 126 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC138869.1-201ENST00000568623 124 ntBASIC2.14□□□□□ -2.07
THBS1P07996 MIR4696-201ENST00000581431 70 ntBASIC2.14□□□□□ -2.07
THBS1P07996 MIR8074-201ENST00000615081 81 ntBASIC2.14□□□□□ -2.07
THBS1P07996 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.14□□□□□ -2.07
THBS1P07996 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
THBS1P07996 AC023934.1-201ENST00000574529 2389 ntBASIC2.14□□□□□ -2.07
THBS1P07996 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
THBS1P07996 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
THBS1P07996 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
THBS1P07996 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
THBS1P07996 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
THBS1P07996 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
THBS1P07996 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
THBS1P07996 MTRNR2L2-201ENST00000604882 87 ntBASIC2.13□□□□□ -2.07
THBS1P07996 MIR7843-201ENST00000622274 79 ntBASIC2.13□□□□□ -2.07
THBS1P07996 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
THBS1P07996 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
THBS1P07996 SNORD115-31-201ENST00000365318 82 ntBASIC2.12□□□□□ -2.07
THBS1P07996 snoU13.25-201ENST00000458945 104 ntBASIC2.12□□□□□ -2.07
THBS1P07996 SNORA77B-201ENST00000578179 125 ntBASIC2.12□□□□□ -2.07
THBS1P07996 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.12□□□□□ -2.07
THBS1P07996 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
THBS1P07996 SNORD33-201ENST00000362761 85 ntBASIC2.11□□□□□ -2.07
THBS1P07996 RNU6-654P-201ENST00000364373 107 ntBASIC2.11□□□□□ -2.07
THBS1P07996 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
THBS1P07996 SNORA24B-201ENST00000384176 131 ntBASIC2.11□□□□□ -2.07
THBS1P07996 RNU6-439P-201ENST00000384188 106 ntBASIC2.11□□□□□ -2.07
THBS1P07996 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
THBS1P07996 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
THBS1P07996 MIR4524B-201ENST00000581569 115 ntBASIC2.11□□□□□ -2.07
THBS1P07996 MIR4769-201ENST00000584126 77 ntBASIC2.11□□□□□ -2.07
THBS1P07996 AC046143.2-201ENST00000609789 160 ntBASIC2.11□□□□□ -2.07
THBS1P07996 Y_RNA.13-201ENST00000362403 112 ntBASIC2.1□□□□□ -2.07
THBS1P07996 SNORA25.4-201ENST00000363666 124 ntBASIC2.1□□□□□ -2.07
THBS1P07996 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
THBS1P07996 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
THBS1P07996 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
THBS1P07996 RNU6-1057P-201ENST00000517162 102 ntBASIC2.1□□□□□ -2.07
THBS1P07996 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
THBS1P07996 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
THBS1P07996 U8.2-201ENST00000363156 134 ntBASIC2.09□□□□□ -2.07
THBS1P07996 RNA5SP425-201ENST00000410336 112 ntBASIC2.09□□□□□ -2.07
THBS1P07996 Y_RNA.697-201ENST00000516776 113 ntBASIC2.09□□□□□ -2.07
THBS1P07996 MIR3664-201ENST00000579074 99 ntBASIC2.09□□□□□ -2.07
THBS1P07996 AC005520.4-201ENST00000604337 90 ntBASIC2.09□□□□□ -2.07
THBS1P07996 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
THBS1P07996 U6.81-201ENST00000612550 106 ntBASIC2.09□□□□□ -2.07
THBS1P07996 U6.100-201ENST00000636230 99 ntBASIC2.09□□□□□ -2.07
THBS1P07996 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
THBS1P07996 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
THBS1P07996 RNU6-330P-201ENST00000363015 107 ntBASIC2.08□□□□□ -2.08
THBS1P07996 RNU6-1065P-201ENST00000384513 106 ntBASIC2.08□□□□□ -2.08
THBS1P07996 MIR599-201ENST00000385069 95 ntBASIC2.08□□□□□ -2.08
THBS1P07996 U3.27-201ENST00000391237 200 ntBASIC2.08□□□□□ -2.08
THBS1P07996 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.08□□□□□ -2.08
THBS1P07996 RNA5SP95-201ENST00000410319 137 ntBASIC2.08□□□□□ -2.08
THBS1P07996 RNU6-752P-201ENST00000516376 102 ntBASIC2.08□□□□□ -2.08
THBS1P07996 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
THBS1P07996 AL773524.1-201ENST00000614065 229 ntBASIC2.08□□□□□ -2.08
THBS1P07996 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
THBS1P07996 SNORA67.3-201ENST00000384366 140 ntBASIC2.07□□□□□ -2.08
THBS1P07996 MIR504-201ENST00000385065 83 ntBASIC2.07□□□□□ -2.08
THBS1P07996 AL606490.4-201ENST00000423117 127 ntBASIC2.07□□□□□ -2.08
THBS1P07996 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
THBS1P07996 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
THBS1P07996 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
THBS1P07996 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
THBS1P07996 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
THBS1P07996 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
THBS1P07996 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
THBS1P07996 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
THBS1P07996 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
THBS1P07996 RNU6-630P-201ENST00000391258 106 ntBASIC2.06□□□□□ -2.08
THBS1P07996 RNU6-1054P-201ENST00000411293 104 ntBASIC2.06□□□□□ -2.08
THBS1P07996 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
THBS1P07996 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
THBS1P07996 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.06□□□□□ -2.08
THBS1P07996 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
THBS1P07996 ZNF209P-201ENST00000593450 2304 ntBASIC2.05□□□□□ -2.08
THBS1P07996 SNORD113.3-201ENST00000364630 78 ntBASIC2.05□□□□□ -2.08
THBS1P07996 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
THBS1P07996 MIR451A-201ENST00000385059 72 ntBASIC2.05□□□□□ -2.08
THBS1P07996 MIR125B2-201ENST00000385128 89 ntBASIC2.05□□□□□ -2.08
THBS1P07996 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms