Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORD78.1-201ENST00000390866 65 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 AC023827.1-201ENST00000569247 97 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 MIR4771-2-201ENST00000577758 74 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 MIR4771-1-201ENST00000582617 74 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 RNU6-1254P-201ENST00000391266 104 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 RNU7-90P-201ENST00000459216 62 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 RNU7-10P-201ENST00000607194 63 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 MIR6082-201ENST00000613604 109 ntBASIC1.84□□□□□ -2.11
PDGFAP04085 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
PDGFAP04085 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
PDGFAP04085 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
PDGFAP04085 MIR125B2-201ENST00000385128 89 ntBASIC1.83□□□□□ -2.12
PDGFAP04085 Y_RNA.648-201ENST00000459455 110 ntBASIC1.83□□□□□ -2.12
PDGFAP04085 Y_RNA.685-201ENST00000516532 108 ntBASIC1.83□□□□□ -2.12
PDGFAP04085 MIR548BB-201ENST00000626714 66 ntBASIC1.83□□□□□ -2.12
PDGFAP04085 Y_RNA.13-201ENST00000362403 112 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 MIR516A2-201ENST00000384888 90 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 MIR516A1-201ENST00000385033 90 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 RNU6-243P-201ENST00000391140 107 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 RPS26P5-201ENST00000418544 335 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 RNU7-171P-201ENST00000459581 62 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 RNA5SP182-201ENST00000516064 82 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 RNU6-765P-201ENST00000516916 99 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 MIR548H5-201ENST00000580314 60 ntBASIC1.82□□□□□ -2.12
PDGFAP04085 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
PDGFAP04085 MIR519C-201ENST00000385053 87 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 SNORD100-201ENST00000408573 76 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 RNU6-994P-201ENST00000410507 111 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 SNORD79.1-201ENST00000516069 84 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 AC013244.2-201ENST00000603396 103 ntBASIC1.81□□□□□ -2.12
PDGFAP04085 RNU6-1124P-201ENST00000384169 107 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 MIR635-201ENST00000384830 98 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 RNU6-1275P-201ENST00000391087 107 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 AC087499.7-201ENST00000441958 109 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 RNU7-40P-201ENST00000516397 64 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 SNORA70.22-201ENST00000517160 124 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFAP04085 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
PDGFAP04085 SNORD36A-201ENST00000362874 73 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 SNORD63B-201ENST00000411005 70 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 AC015818.7-201ENST00000428754 109 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 SNORD4B-201ENST00000459083 72 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 SNORD13-201ENST00000459299 104 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 RNU7-156P-201ENST00000517214 74 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 AC006160.2-201ENST00000637708 154 ntBASIC1.79□□□□□ -2.12
PDGFAP04085 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PDGFAP04085 Y_RNA.56-201ENST00000362798 112 ntBASIC1.78□□□□□ -2.12
PDGFAP04085 SNORD115-37-201ENST00000363768 82 ntBASIC1.78□□□□□ -2.12
PDGFAP04085 SNORD12-201ENST00000391002 90 ntBASIC1.78□□□□□ -2.12
PDGFAP04085 MIR4676-201ENST00000583078 72 ntBASIC1.78□□□□□ -2.12
PDGFAP04085 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
PDGFAP04085 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PDGFAP04085 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PDGFAP04085 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PDGFAP04085 SNORD115-27-201ENST00000364430 82 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 RNU6-364P-201ENST00000384387 107 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 Y_RNA.536-201ENST00000384621 113 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 Y_RNA.607-201ENST00000410597 98 ntBASIC1.77□□□□□ -2.13
PDGFAP04085 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PDGFAP04085 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PDGFAP04085 Y_RNA.42-201ENST00000362660 108 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 RNU6-228P-201ENST00000362700 106 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 RNU6-466P-201ENST00000391224 103 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR938-201ENST00000401216 83 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR1236-201ENST00000408340 102 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 Y_RNA.697-201ENST00000516776 113 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR4666B-201ENST00000578142 81 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
PDGFAP04085 MIR378A-201ENST00000362177 66 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 Y_RNA.437-201ENST00000384113 113 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 MIR222-201ENST00000384992 110 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 AC067940.1-201ENST00000458411 300 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 RNU7-85P-201ENST00000458851 63 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 RNU7-106P-201ENST00000459514 67 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 AC093729.1-201ENST00000513074 128 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 RNU6-65P-201ENST00000516332 98 ntBASIC1.75□□□□□ -2.13
PDGFAP04085 RNU4-32P-201ENST00000363404 141 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDGFAP04085 MIR519A1-201ENST00000385257 85 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 snoU13.11-201ENST00000459219 104 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 TRAJ51-201ENST00000504127 63 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 MIR4536-1-201ENST00000583537 88 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 SNORD92-201ENST00000585078 85 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 AC027335.2-201ENST00000624030 375 ntBASIC1.74□□□□□ -2.13
PDGFAP04085 RNU6-524P-201ENST00000384270 107 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 MIR499A-201ENST00000384903 122 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 298.6 ms