Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR4500-201ENST00000579472 76 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 AC096720.1-201ENST00000604441 183 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 AL096861.1-201ENST00000610899 123 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 MIR8063-201ENST00000621930 81 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL2A1P02458 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL2A1P02458 RNU6-1313P-201ENST00000362622 102 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-865P-201ENST00000364772 107 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-716P-201ENST00000365621 103 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 Y_RNA.437-201ENST00000384113 113 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-1152P-201ENST00000384576 107 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 Y_RNA.567-201ENST00000384736 106 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 MIR181B2-201ENST00000385004 89 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL2A1P02458 AL451046.2-201ENST00000403074 277 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNA5SP237-201ENST00000410414 113 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 AC005908.1-201ENST00000468701 347 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-1018P-201ENST00000516577 106 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU7-137P-201ENST00000516788 62 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 Y_RNA.705-201ENST00000516862 110 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-1006P-201ENST00000516998 103 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-158P-201ENST00000517104 100 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-90P-201ENST00000606352 106 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 MIR8087-201ENST00000612745 78 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 AC012676.2-201ENST00000619258 186 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
COL2A1P02458 RNU6-1276P-201ENST00000365372 104 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 RNU6-787P-201ENST00000384032 107 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 SNORD116-22-201ENST00000384430 92 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 RNU6-813P-201ENST00000384691 107 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 SNORD41-201ENST00000386967 70 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 RNU6-1275P-201ENST00000391087 107 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 MIR936-201ENST00000401264 98 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC244636.1-201ENST00000421152 228 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.05□□□□□ -2.24
COL2A1P02458 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
COL2A1P02458 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC025521.1-201ENST00000621624 286 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL2A1P02458 MIR588-201ENST00000384900 83 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
COL2A1P02458 RNU1-78P-201ENST00000391248 165 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 MIR548G-201ENST00000408442 89 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 RNU6-955P-201ENST00000410497 104 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 BX276092.1-201ENST00000427368 251 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC015818.7-201ENST00000428754 109 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC087499.7-201ENST00000441958 109 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 AC141846.1-201ENST00000568348 142 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 MIR4668-201ENST00000582284 70 ntBASIC1.05□□□□□ -2.24
COL2A1P02458 RNU6-1123P-201ENST00000362347 106 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU6-654P-201ENST00000364373 107 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 SNORD115-27-201ENST00000364430 82 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU6-219P-201ENST00000364728 107 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU6-652P-201ENST00000365488 107 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 MIR653-201ENST00000385279 96 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU4-83P-201ENST00000410863 133 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU7-48P-201ENST00000458875 63 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 snoU13.21-201ENST00000459368 105 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 RNU6-322P-201ENST00000516010 103 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 SNORD111.1-201ENST00000516421 86 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.04□□□□□ -2.24
COL2A1P02458 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 SNORA77B-201ENST00000578179 125 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 AC090897.1-201ENST00000580909 226 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 MIR6740-201ENST00000618268 113 ntBASIC1.04□□□□□ -2.24
COL2A1P02458 MIR934-201ENST00000401241 83 ntBASIC1.03□□□□□ -2.24
COL2A1P02458 AL161935.2-201ENST00000414627 60 ntBASIC1.03□□□□□ -2.24
COL2A1P02458 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
COL2A1P02458 AC008834.1-201ENST00000511612 175 ntBASIC1.03□□□□□ -2.24
COL2A1P02458 RNU7-153P-201ENST00000516455 62 ntBASIC1.03□□□□□ -2.24
COL2A1P02458 AL513043.2-201ENST00000573941 143 ntBASIC1.03□□□□□ -2.24
COL2A1P02458 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
COL2A1P02458 Y_RNA.98-201ENST00000363109 102 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 SNORD38.1-201ENST00000363863 68 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 Y_RNA.377-201ENST00000365644 108 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 RNA5SP212-201ENST00000391223 107 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 Y_RNA.620-201ENST00000411009 88 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 AC096949.1-201ENST00000412047 152 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 MIR5588-201ENST00000581890 63 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 MIR548BB-201ENST00000626714 66 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 U6.109-201ENST00000636749 87 ntBASIC1.02□□□□□ -2.25
COL2A1P02458 RNA5SP133-201ENST00000363368 119 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 SNORD114-10-201ENST00000363409 72 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 RNU6-979P-201ENST00000383896 107 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 RNU6-524P-201ENST00000384270 107 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 RNU6-242P-201ENST00000384359 107 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 snoU13.2-201ENST00000459201 104 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.01□□□□□ -2.25
COL2A1P02458 AC133485.1-201ENST00000567176 124 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 AL662814.1-201ENST00000617364 121 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 MIR6516-201ENST00000630554 81 ntBASIC1.01□□□□□ -2.25
COL2A1P02458 Y_RNA.219-201ENST00000364232 113 ntBASIC1□□□□□ -2.25
COL2A1P02458 Y_RNA.330-201ENST00000365230 109 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms