Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 Y_RNA.344-201ENST00000365381 112 ntBASIC0.59□□□□□ -2.31
NGFP01138 Y_RNA.353-201ENST00000365440 108 ntBASIC0.59□□□□□ -2.31
NGFP01138 SNORA72.6-201ENST00000384520 129 ntBASIC0.59□□□□□ -2.31
NGFP01138 Y_RNA.536-201ENST00000384621 113 ntBASIC0.59□□□□□ -2.31
NGFP01138 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
NGFP01138 RPL39P34-201ENST00000477141 156 ntBASIC0.59□□□□□ -2.31
NGFP01138 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
NGFP01138 uc_338.16-201ENST00000621804 95 ntBASIC0.59□□□□□ -2.31
NGFP01138 AP001362.1-201ENST00000625165 124 ntBASIC0.59□□□□□ -2.31
NGFP01138 MIR1255B1-201ENST00000636325 63 ntBASIC0.59□□□□□ -2.31
NGFP01138 Y_RNA.362-201ENST00000365518 110 ntBASIC0.58□□□□□ -2.32
NGFP01138 RNU6-291P-201ENST00000384720 107 ntBASIC0.58□□□□□ -2.32
NGFP01138 RNU6-1333P-201ENST00000516162 93 ntBASIC0.58□□□□□ -2.32
NGFP01138 RNU6-521P-201ENST00000516663 105 ntBASIC0.58□□□□□ -2.32
NGFP01138 Y_RNA.56-201ENST00000362798 112 ntBASIC0.57□□□□□ -2.32
NGFP01138 Y_RNA.85-201ENST00000363014 111 ntBASIC0.57□□□□□ -2.32
NGFP01138 Y_RNA.174-201ENST00000363781 105 ntBASIC0.57□□□□□ -2.32
NGFP01138 RNA5SP117-201ENST00000365294 118 ntBASIC0.57□□□□□ -2.32
NGFP01138 RNU6-1117P-201ENST00000384525 104 ntBASIC0.57□□□□□ -2.32
NGFP01138 Y_RNA.649-201ENST00000459077 103 ntBASIC0.57□□□□□ -2.32
NGFP01138 RNU6-1018P-201ENST00000516577 106 ntBASIC0.57□□□□□ -2.32
NGFP01138 DEFB131E-201ENST00000532329 154 ntBASIC0.57□□□□□ -2.32
NGFP01138 MTND5P34-201ENST00000568888 325 ntBASIC0.57□□□□□ -2.32
NGFP01138 MIR376B-201ENST00000614515 100 ntBASIC0.57□□□□□ -2.32
NGFP01138 RNU4-67P-201ENST00000364569 141 ntBASIC0.56□□□□□ -2.32
NGFP01138 RNU6-865P-201ENST00000364772 107 ntBASIC0.56□□□□□ -2.32
NGFP01138 RNU6-22P-201ENST00000384355 107 ntBASIC0.56□□□□□ -2.32
NGFP01138 MIR936-201ENST00000401264 98 ntBASIC0.56□□□□□ -2.32
NGFP01138 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
NGFP01138 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
NGFP01138 AL353813.1-201ENST00000440700 253 ntBASIC0.56□□□□□ -2.32
NGFP01138 SNORD33.1-201ENST00000516213 88 ntBASIC0.56□□□□□ -2.32
NGFP01138 Y_RNA.697-201ENST00000516776 113 ntBASIC0.56□□□□□ -2.32
NGFP01138 RNU6-789P-201ENST00000517105 102 ntBASIC0.56□□□□□ -2.32
NGFP01138 AC007012.1-201ENST00000567192 175 ntBASIC0.56□□□□□ -2.32
NGFP01138 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
NGFP01138 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
NGFP01138 Y_RNA.32-201ENST00000362589 110 ntBASIC0.55□□□□□ -2.32
NGFP01138 Y_RNA.360-201ENST00000365512 102 ntBASIC0.55□□□□□ -2.32
NGFP01138 MIR34C-201ENST00000384831 77 ntBASIC0.55□□□□□ -2.32
NGFP01138 MIR193B-201ENST00000384907 83 ntBASIC0.55□□□□□ -2.32
NGFP01138 RNU6-1168P-201ENST00000390831 104 ntBASIC0.55□□□□□ -2.32
NGFP01138 MIR1912-201ENST00000410389 80 ntBASIC0.55□□□□□ -2.32
NGFP01138 RNU6-406P-201ENST00000516470 107 ntBASIC0.55□□□□□ -2.32
NGFP01138 SNORA31.14-201ENST00000516728 116 ntBASIC0.55□□□□□ -2.32
NGFP01138 RNU6-135P-201ENST00000516769 101 ntBASIC0.55□□□□□ -2.32
NGFP01138 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.55□□□□□ -2.32
NGFP01138 AL670379.3-201ENST00000605040 251 ntBASIC0.55□□□□□ -2.32
NGFP01138 AL365222.1-201ENST00000614661 98 ntBASIC0.55□□□□□ -2.32
NGFP01138 AL162726.3-218ENST00000636401 95 ntBASIC0.55□□□□□ -2.32
NGFP01138 RNU6-1313P-201ENST00000362622 102 ntBASIC0.54□□□□□ -2.32
NGFP01138 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
NGFP01138 Y_RNA.261-201ENST00000364631 102 ntBASIC0.54□□□□□ -2.32
NGFP01138 RNA5SP205-201ENST00000364653 136 ntBASIC0.54□□□□□ -2.32
NGFP01138 RNU6-535P-201ENST00000384722 107 ntBASIC0.54□□□□□ -2.32
NGFP01138 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
NGFP01138 MIR548A3-201ENST00000385297 97 ntBASIC0.54□□□□□ -2.32
NGFP01138 RNU6-679P-201ENST00000391003 106 ntBASIC0.54□□□□□ -2.32
NGFP01138 MIR548I2-201ENST00000408348 149 ntBASIC0.54□□□□□ -2.32
NGFP01138 RNU6-62P-201ENST00000516526 102 ntBASIC0.54□□□□□ -2.32
NGFP01138 RNU6-1006P-201ENST00000516998 103 ntBASIC0.54□□□□□ -2.32
NGFP01138 MIR1273G-201ENST00000577677 100 ntBASIC0.54□□□□□ -2.32
NGFP01138 MIR3678-201ENST00000578455 94 ntBASIC0.54□□□□□ -2.32
NGFP01138 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NGFP01138 Y_RNA.507-201ENST00000384500 99 ntBASIC0.53□□□□□ -2.32
NGFP01138 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
NGFP01138 RNU6-479P-201ENST00000516348 105 ntBASIC0.53□□□□□ -2.32
NGFP01138 MIR4500-201ENST00000579472 76 ntBASIC0.53□□□□□ -2.32
NGFP01138 MIR548H5-201ENST00000580314 60 ntBASIC0.53□□□□□ -2.32
NGFP01138 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
NGFP01138 AL035470.1-201ENST00000622571 220 ntBASIC0.53□□□□□ -2.32
NGFP01138 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
NGFP01138 MIR101-2-201ENST00000362195 79 ntBASIC0.52□□□□□ -2.33
NGFP01138 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
NGFP01138 Y_RNA.309-201ENST00000365046 111 ntBASIC0.52□□□□□ -2.33
NGFP01138 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
NGFP01138 RNU6-409P-201ENST00000384114 104 ntBASIC0.52□□□□□ -2.33
NGFP01138 RNU6-816P-201ENST00000390914 107 ntBASIC0.52□□□□□ -2.33
NGFP01138 RNU6-1268P-201ENST00000391214 107 ntBASIC0.52□□□□□ -2.33
NGFP01138 RNU6-1239P-201ENST00000391310 107 ntBASIC0.52□□□□□ -2.33
NGFP01138 SNORA7.5-201ENST00000410672 110 ntBASIC0.52□□□□□ -2.33
NGFP01138 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.52□□□□□ -2.33
NGFP01138 SNRPGP12-201ENST00000449481 213 ntBASIC0.52□□□□□ -2.33
NGFP01138 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
NGFP01138 RNU6-834P-201ENST00000362367 110 ntBASIC0.51□□□□□ -2.33
NGFP01138 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
NGFP01138 RNA5SP245-201ENST00000364239 121 ntBASIC0.51□□□□□ -2.33
NGFP01138 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
NGFP01138 RNU6-571P-201ENST00000384128 107 ntBASIC0.51□□□□□ -2.33
NGFP01138 Y_RNA.549-201ENST00000384657 102 ntBASIC0.51□□□□□ -2.33
NGFP01138 MIR548A1-201ENST00000385041 97 ntBASIC0.51□□□□□ -2.33
NGFP01138 MIR519A1-201ENST00000385257 85 ntBASIC0.51□□□□□ -2.33
NGFP01138 MIR644A-201ENST00000385262 94 ntBASIC0.51□□□□□ -2.33
NGFP01138 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
NGFP01138 AC244505.6-201ENST00000452829 130 ntBASIC0.51□□□□□ -2.33
NGFP01138 RNA5SP94-201ENST00000516917 108 ntBASIC0.51□□□□□ -2.33
NGFP01138 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
NGFP01138 Y_RNA.155-201ENST00000363632 101 ntBASIC0.5□□□□□ -2.33
NGFP01138 Y_RNA.377-201ENST00000365644 108 ntBASIC0.5□□□□□ -2.33
NGFP01138 RNU6-1201P-201ENST00000384227 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms