Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-664P-201ENST00000362381 107 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 SNORA25.3-201ENST00000363205 127 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 Y_RNA.536-201ENST00000384621 113 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR583-201ENST00000384846 75 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.53□□□□□ -2
ALDH1A1P00352 MIR2115-201ENST00000516657 100 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR4696-201ENST00000581431 70 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 snoU13.31-201ENST00000607291 104 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 AL627230.6-201ENST00000611129 280 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
ALDH1A1P00352 RNU6-1260P-201ENST00000362944 107 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 SNORD115-22-201ENST00000364456 82 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 snoU13.25-201ENST00000458945 104 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 RNA5SP182-201ENST00000516064 82 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ALDH1A1P00352 U6.81-201ENST00000612550 106 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 MIR8053-201ENST00000613344 75 ntBASIC2.52□□□□□ -2.01
ALDH1A1P00352 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.51□□□□□ -2.01
ALDH1A1P00352 SNORA24B-201ENST00000384176 131 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 SNORD116-24-201ENST00000384549 92 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 SNORA48.3-201ENST00000391081 134 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 RN7SL274P-201ENST00000492268 272 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 AC097510.1-201ENST00000510945 133 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 RNU6-922P-201ENST00000516753 99 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 RNU6-881P-201ENST00000516813 102 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 MIR5089-201ENST00000580047 84 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 MIR4511-201ENST00000582784 87 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 MTRNR2L2-201ENST00000604882 87 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.51□□□□□ -2.01
ALDH1A1P00352 MIR377-201ENST00000362145 69 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 SNORA3A-201ENST00000364113 130 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 RNA5SP259-201ENST00000365541 109 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 SNORD101-201ENST00000384027 73 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 MIR513A1-201ENST00000385138 129 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 SNORD93-201ENST00000408813 74 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 RNA5SP450-201ENST00000411206 102 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 AC108667.1-201ENST00000428618 249 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
ALDH1A1P00352 Y_RNA.809-201ENST00000516058 95 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 AP003716.2-201ENST00000528260 108 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 MIR6516-201ENST00000630554 81 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 U6.100-201ENST00000636230 99 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 AC103706.3-201ENST00000636297 85 ntBASIC2.5□□□□□ -2.01
ALDH1A1P00352 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ALDH1A1P00352 SNORD45.1-201ENST00000363181 77 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 RNU6-824P-201ENST00000363724 104 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 RNU1-36P-201ENST00000365130 165 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 MIR548H5-201ENST00000580314 60 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.49□□□□□ -2.01
ALDH1A1P00352 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.49□□□□□ -2.01
ALDH1A1P00352 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.49□□□□□ -2.01
ALDH1A1P00352 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ALDH1A1P00352 RNU6-669P-201ENST00000365575 107 ntBASIC2.48□□□□□ -2.01
ALDH1A1P00352 AC013244.2-201ENST00000603396 103 ntBASIC2.48□□□□□ -2.01
ALDH1A1P00352 SNRPGP19-201ENST00000603826 189 ntBASIC2.48□□□□□ -2.01
ALDH1A1P00352 RNU7-10P-201ENST00000607194 63 ntBASIC2.48□□□□□ -2.01
ALDH1A1P00352 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
ALDH1A1P00352 MIR101-2-201ENST00000362195 79 ntBASIC2.47□□□□□ -2.01
ALDH1A1P00352 RNU6-580P-201ENST00000365159 107 ntBASIC2.47□□□□□ -2.01
ALDH1A1P00352 AC110620.1-201ENST00000416042 228 ntBASIC2.47□□□□□ -2.01
ALDH1A1P00352 MIR18B-201ENST00000454574 71 ntBASIC2.47□□□□□ -2.01
ALDH1A1P00352 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.47□□□□□ -2.01
ALDH1A1P00352 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.47□□□□□ -2.01
ALDH1A1P00352 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ALDH1A1P00352 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALDH1A1P00352 RNU6-1216P-201ENST00000362590 107 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 Y_RNA.56-201ENST00000362798 112 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 RNU6-403P-201ENST00000363163 104 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 Y_RNA.118-201ENST00000363300 101 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 RNU6-250P-201ENST00000516958 103 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
ALDH1A1P00352 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALDH1A1P00352 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
ALDH1A1P00352 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
ALDH1A1P00352 SNORD113.1-201ENST00000363280 73 ntBASIC2.45□□□□□ -2.02
ALDH1A1P00352 MIR1185-1-201ENST00000408598 86 ntBASIC2.45□□□□□ -2.02
ALDH1A1P00352 RNU7-193P-201ENST00000516723 65 ntBASIC2.45□□□□□ -2.02
ALDH1A1P00352 SNORA31.25-201ENST00000517242 134 ntBASIC2.45□□□□□ -2.02
ALDH1A1P00352 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALDH1A1P00352 MIR378A-201ENST00000362177 66 ntBASIC2.44□□□□□ -2.02
ALDH1A1P00352 RNU6-654P-201ENST00000364373 107 ntBASIC2.44□□□□□ -2.02
ALDH1A1P00352 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALDH1A1P00352 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 RNU6-604P-201ENST00000390917 100 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 RNU6-1054P-201ENST00000411293 104 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 AC079150.2-201ENST00000443733 78 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.43□□□□□ -2.02
ALDH1A1P00352 GHRLOS.1-201ENST00000610995 70 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.43□□□□□ -2.02
ALDH1A1P00352 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms