Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SNORD58C-201ENST00000365223 64 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 MIR1287-201ENST00000408492 90 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 RNU6-735P-201ENST00000410612 107 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 SUMO1P3-201ENST00000439961 304 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 RNU6-1234P-201ENST00000516877 103 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 Y_RNA.773-201ENST00000607168 90 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 AC244669.1-204ENST00000621564 178 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 AC091304.10-201ENST00000641554 121 ntBASIC0.38□□□□□ -2.35
NKX2-2O95096 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
NKX2-2O95096 MIR539-201ENST00000365690 78 ntBASIC0.37□□□□□ -2.35
NKX2-2O95096 MIR548D2-201ENST00000384955 97 ntBASIC0.37□□□□□ -2.35
NKX2-2O95096 MIR548I2-201ENST00000408348 149 ntBASIC0.37□□□□□ -2.35
NKX2-2O95096 MIR7107-201ENST00000611489 80 ntBASIC0.37□□□□□ -2.35
NKX2-2O95096 AC025166.1-201ENST00000612411 163 ntBASIC0.37□□□□□ -2.35
NKX2-2O95096 RNU6-1061P-201ENST00000516530 99 ntBASIC0.36□□□□□ -2.35
NKX2-2O95096 RNU6-521P-201ENST00000516663 105 ntBASIC0.36□□□□□ -2.35
NKX2-2O95096 AL078603.1-201ENST00000603824 313 ntBASIC0.36□□□□□ -2.35
NKX2-2O95096 RNU6-1099P-201ENST00000363533 107 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 Y_RNA.360-201ENST00000365512 102 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 MIR635-201ENST00000384830 98 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 Y_RNA.586-201ENST00000391146 98 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 RNA5SP227-201ENST00000516184 113 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 RNA5SP220-201ENST00000516298 104 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 MIR1255B1-201ENST00000636325 63 ntBASIC0.35□□□□□ -2.35
NKX2-2O95096 SNORD115-24-201ENST00000363528 82 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 SNORD50.2-201ENST00000365465 70 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 MIR34C-201ENST00000384831 77 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 MIR519A1-201ENST00000385257 85 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 MT-TR-201ENST00000387439 65 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 RNU2-59P-201ENST00000410482 191 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 RNU6-772P-201ENST00000516042 105 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 Y_RNA.703-201ENST00000516846 111 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 MTND5P18-201ENST00000445624 1801 ntBASIC0.34□□□□□ -2.36
NKX2-2O95096 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 RNY4P6-201ENST00000363667 96 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 RNU6-1062P-201ENST00000383908 107 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 RNU6-571P-201ENST00000384128 107 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 BX276092.1-201ENST00000427368 251 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 SNRPGP12-201ENST00000449481 213 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 AC097635.1-201ENST00000450678 155 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
NKX2-2O95096 Y_RNA.116-201ENST00000363292 103 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 Y_RNA.346-201ENST00000365385 112 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 RNU6-1126P-201ENST00000384002 107 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.32□□□□□ -2.36
NKX2-2O95096 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 AC022709.1-201ENST00000615967 87 ntBASIC0.32□□□□□ -2.36
NKX2-2O95096 Y_RNA.49-201ENST00000362714 112 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNU6-170P-201ENST00000362832 104 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNU6-363P-201ENST00000362895 105 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNU4-67P-201ENST00000364569 141 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNA5SP193-201ENST00000410353 107 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNU6-1211P-201ENST00000459179 105 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
NKX2-2O95096 RNA5SP403-201ENST00000363598 108 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 Y_RNA.344-201ENST00000365381 112 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 RNU6-746P-201ENST00000384112 109 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 SNORD38.2-201ENST00000384470 69 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 RNU6-971P-201ENST00000516920 106 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 RNU7-161P-201ENST00000517289 62 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 MIR3133-201ENST00000583157 78 ntBASIC0.3□□□□□ -2.36
NKX2-2O95096 AL157777.2-201ENST00000258070 137 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-1313P-201ENST00000362622 102 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-80P-201ENST00000384195 107 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 MIR599-201ENST00000385069 95 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 Y_RNA.630-201ENST00000411370 108 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 AC069271.1-201ENST00000445577 156 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 MIR6734-201ENST00000621166 68 ntBASIC0.29□□□□□ -2.36
NKX2-2O95096 RNU6-726P-201ENST00000364680 107 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 RNU6-42P-201ENST00000384165 107 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 MIR613-201ENST00000385248 95 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 SNORA7.5-201ENST00000410672 110 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 SNORD63B-201ENST00000411005 70 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 RNU6-1018P-201ENST00000516577 106 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 Y_RNA.712-201ENST00000517011 92 ntBASIC0.28□□□□□ -2.36
NKX2-2O95096 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 Y_RNA.507-201ENST00000384500 99 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 MIR518E-201ENST00000385252 88 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 AL353813.1-201ENST00000440700 253 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 RNU7-107P-201ENST00000459121 61 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 RNU6-850P-201ENST00000516934 103 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 RNU6-1006P-201ENST00000516998 103 ntBASIC0.27□□□□□ -2.37
NKX2-2O95096 Y_RNA.342-201ENST00000365352 113 ntBASIC0.26□□□□□ -2.37
NKX2-2O95096 Y_RNA.362-201ENST00000365518 110 ntBASIC0.26□□□□□ -2.37
NKX2-2O95096 RNU6-716P-201ENST00000365621 103 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms