Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
RNF40O75150 RNU6-403P-201ENST00000363163 104 ntBASIC2.64□□□□□ -1.99
RNF40O75150 RNA5SP320-201ENST00000516263 124 ntBASIC2.64□□□□□ -1.99
RNF40O75150 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
RNF40O75150 MIR6082-201ENST00000613604 109 ntBASIC2.64□□□□□ -1.99
RNF40O75150 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF40O75150 ZNF658B-202ENST00000615961 3375 ntBASIC2.64□□□□□ -1.99
RNF40O75150 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RNF40O75150 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF40O75150 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNF40O75150 SNORD45.1-201ENST00000363181 77 ntBASIC2.63□□□□□ -1.99
RNF40O75150 SNORD113.1-201ENST00000363280 73 ntBASIC2.63□□□□□ -1.99
RNF40O75150 RNU6-439P-201ENST00000384188 106 ntBASIC2.63□□□□□ -1.99
RNF40O75150 RNU6-1054P-201ENST00000411293 104 ntBASIC2.63□□□□□ -1.99
RNF40O75150 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF40O75150 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF40O75150 MIR27B-201ENST00000385129 97 ntBASIC2.62□□□□□ -1.99
RNF40O75150 RNU6-604P-201ENST00000390917 100 ntBASIC2.62□□□□□ -1.99
RNF40O75150 AL133373.1-201ENST00000497098 94 ntBASIC2.62□□□□□ -1.99
RNF40O75150 RNU6-765P-201ENST00000516916 99 ntBASIC2.62□□□□□ -1.99
RNF40O75150 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.62□□□□□ -1.99
RNF40O75150 Y_RNA.13-201ENST00000362403 112 ntBASIC2.61□□□□□ -1.99
RNF40O75150 RNU6-1216P-201ENST00000362590 107 ntBASIC2.61□□□□□ -1.99
RNF40O75150 RNA5SP264-201ENST00000363115 107 ntBASIC2.61□□□□□ -1.99
RNF40O75150 SNORA6-201ENST00000384033 151 ntBASIC2.61□□□□□ -1.99
RNF40O75150 AC079150.2-201ENST00000443733 78 ntBASIC2.61□□□□□ -1.99
RNF40O75150 RNU7-185P-201ENST00000459215 60 ntBASIC2.61□□□□□ -1.99
RNF40O75150 snoU13.26-201ENST00000459452 105 ntBASIC2.61□□□□□ -1.99
RNF40O75150 RNU7-193P-201ENST00000516723 65 ntBASIC2.61□□□□□ -1.99
RNF40O75150 Y_RNA.697-201ENST00000516776 113 ntBASIC2.61□□□□□ -1.99
RNF40O75150 MIR103A2-201ENST00000362154 78 ntBASIC2.6□□□□□ -1.99
RNF40O75150 Y_RNA.258-201ENST00000364613 105 ntBASIC2.6□□□□□ -1.99
RNF40O75150 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
RNF40O75150 MIR451A-201ENST00000385059 72 ntBASIC2.6□□□□□ -1.99
RNF40O75150 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
RNF40O75150 RNU4-53P-201ENST00000410828 140 ntBASIC2.6□□□□□ -1.99
RNF40O75150 RNA5SP82-201ENST00000516707 92 ntBASIC2.6□□□□□ -1.99
RNF40O75150 MIR7843-201ENST00000622274 79 ntBASIC2.6□□□□□ -1.99
RNF40O75150 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF40O75150 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF40O75150 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
RNF40O75150 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
RNF40O75150 snoU13.21-201ENST00000459368 105 ntBASIC2.59□□□□□ -1.99
RNF40O75150 SNORA77B-201ENST00000578179 125 ntBASIC2.59□□□□□ -1.99
RNF40O75150 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.59□□□□□ -2
RNF40O75150 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
RNF40O75150 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
RNF40O75150 RNU6-977P-201ENST00000516411 103 ntBASIC2.58□□□□□ -2
RNF40O75150 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.58□□□□□ -2
RNF40O75150 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
RNF40O75150 RNU1-52P-201ENST00000384190 164 ntBASIC2.57□□□□□ -2
RNF40O75150 MIR504-201ENST00000385065 83 ntBASIC2.57□□□□□ -2
RNF40O75150 MIR599-201ENST00000385069 95 ntBASIC2.57□□□□□ -2
RNF40O75150 AL109933.3-201ENST00000619095 188 ntBASIC2.57□□□□□ -2
RNF40O75150 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
RNF40O75150 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RNF40O75150 AC023934.1-201ENST00000574529 2389 ntBASIC2.56□□□□□ -2
RNF40O75150 RNA5SP425-201ENST00000410336 112 ntBASIC2.56□□□□□ -2
RNF40O75150 RNU6-752P-201ENST00000516376 102 ntBASIC2.56□□□□□ -2
RNF40O75150 MIR514B-201ENST00000516774 80 ntBASIC2.56□□□□□ -2
RNF40O75150 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
RNF40O75150 MIR633-201ENST00000384821 98 ntBASIC2.55□□□□□ -2
RNF40O75150 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.55□□□□□ -2
RNF40O75150 RNU6-1177P-201ENST00000391058 104 ntBASIC2.55□□□□□ -2
RNF40O75150 SNORA40.6-201ENST00000391153 128 ntBASIC2.55□□□□□ -2
RNF40O75150 MIR1257-201ENST00000408490 117 ntBASIC2.55□□□□□ -2
RNF40O75150 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.55□□□□□ -2
RNF40O75150 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF40O75150 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF40O75150 RNU6-1052P-201ENST00000411398 104 ntBASIC2.54□□□□□ -2
RNF40O75150 snoU13.15-201ENST00000459407 104 ntBASIC2.54□□□□□ -2
RNF40O75150 RNU6-237P-201ENST00000515985 71 ntBASIC2.54□□□□□ -2
RNF40O75150 RNU6-719P-201ENST00000516671 104 ntBASIC2.54□□□□□ -2
RNF40O75150 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
RNF40O75150 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RNF40O75150 RNU6-382P-201ENST00000365181 106 ntBASIC2.53□□□□□ -2
RNF40O75150 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
RNF40O75150 RNU6-947P-201ENST00000516264 106 ntBASIC2.53□□□□□ -2
RNF40O75150 AC138907.6-201ENST00000568401 126 ntBASIC2.53□□□□□ -2
RNF40O75150 AC138869.1-201ENST00000568623 124 ntBASIC2.53□□□□□ -2
RNF40O75150 MIR4524B-201ENST00000581569 115 ntBASIC2.53□□□□□ -2
RNF40O75150 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RNF40O75150 RNU6-1187P-201ENST00000364771 110 ntBASIC2.52□□□□□ -2.01
RNF40O75150 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
RNF40O75150 RN7SKP223-201ENST00000410582 62 ntBASIC2.52□□□□□ -2.01
RNF40O75150 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF40O75150 MIR4648-201ENST00000580107 72 ntBASIC2.52□□□□□ -2.01
RNF40O75150 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF40O75150 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
RNF40O75150 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.51□□□□□ -2.01
RNF40O75150 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF40O75150 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
RNF40O75150 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF40O75150 U3.27-201ENST00000391237 200 ntBASIC2.5□□□□□ -2.01
RNF40O75150 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.5□□□□□ -2.01
RNF40O75150 RNU6-274P-201ENST00000459566 107 ntBASIC2.5□□□□□ -2.01
RNF40O75150 AC069503.3-201ENST00000618674 145 ntBASIC2.5□□□□□ -2.01
RNF40O75150 MIR302D-201ENST00000362275 68 ntBASIC2.49□□□□□ -2.01
RNF40O75150 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
RNF40O75150 RNA5SP245-201ENST00000364239 121 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms