Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
PRAMEF4O60810 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 Y_RNA.173-201ENST00000363776 113 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 MTATP8P2-201ENST00000435212 202 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 RNU6-977P-201ENST00000516411 103 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 RNU6-90P-201ENST00000606352 106 ntBASIC1.19□□□□□ -2.22
PRAMEF4O60810 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
PRAMEF4O60810 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PRAMEF4O60810 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 SPINT5P-201ENST00000448174 155 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 AC109327.2-201ENST00000448339 378 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 RNU7-56P-201ENST00000458744 62 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.18□□□□□ -2.22
PRAMEF4O60810 AC008608.1-201ENST00000603910 127 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 RMST_2.1-201ENST00000617263 136 ntBASIC1.18□□□□□ -2.22
PRAMEF4O60810 RNU6-1244P-201ENST00000363614 108 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 RNU6-364P-201ENST00000384387 107 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 BX276092.1-201ENST00000427368 251 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 FABP5P4-201ENST00000437203 171 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 RNU7-102P-201ENST00000458948 62 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 SNORA40.13-201ENST00000516379 120 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 MTND5P40-201ENST00000559945 246 ntBASIC1.17□□□□□ -2.22
PRAMEF4O60810 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PRAMEF4O60810 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRAMEF4O60810 RNU6-571P-201ENST00000384128 107 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 Y_RNA.467-201ENST00000384297 102 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 Y_RNA.567-201ENST00000384736 106 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 MIR520F-201ENST00000384824 87 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 AC013244.2-201ENST00000603396 103 ntBASIC1.16□□□□□ -2.22
PRAMEF4O60810 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRAMEF4O60810 RNA5SP432-201ENST00000362480 116 ntBASIC1.15□□□□□ -2.23
PRAMEF4O60810 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
PRAMEF4O60810 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
PRAMEF4O60810 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
PRAMEF4O60810 RNU6-1298P-201ENST00000362456 101 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 RNU6-644P-201ENST00000391155 98 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 MIR942-201ENST00000401111 86 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 SNORD100-201ENST00000408573 76 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 RNU7-61P-201ENST00000515897 61 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 RNU6-850P-201ENST00000516934 103 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 AL136317.1-201ENST00000612653 226 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.14□□□□□ -2.23
PRAMEF4O60810 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
PRAMEF4O60810 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
PRAMEF4O60810 RNU1-119P-201ENST00000391122 165 ntBASIC1.13□□□□□ -2.23
PRAMEF4O60810 RNU6-86P-201ENST00000606534 107 ntBASIC1.13□□□□□ -2.23
PRAMEF4O60810 MIR2052-201ENST00000636055 55 ntBASIC1.13□□□□□ -2.23
PRAMEF4O60810 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PRAMEF4O60810 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
PRAMEF4O60810 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 RNU6-813P-201ENST00000384691 107 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 MIR520H-201ENST00000385126 88 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 RNA5SP255-201ENST00000516370 107 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 AL359821.1-201ENST00000605519 182 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
PRAMEF4O60810 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 MIR488-201ENST00000365739 83 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 AL603825.1-201ENST00000438481 80 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 Y_RNA.694-201ENST00000516677 117 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 Y_RNA.697-201ENST00000516776 113 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 Y_RNA.705-201ENST00000516862 110 ntBASIC1.11□□□□□ -2.23
PRAMEF4O60810 MIR101-2-201ENST00000362195 79 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 Y_RNA.56-201ENST00000362798 112 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 Y_RNA.96-201ENST00000363092 109 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 Y_RNA.536-201ENST00000384621 113 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 RNU6-291P-201ENST00000384720 107 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 RNU6-887P-201ENST00000410660 100 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
PRAMEF4O60810 AC103810.7-201ENST00000607821 91 ntBASIC1.1□□□□□ -2.23
PRAMEF4O60810 RNU6-972P-201ENST00000391208 107 ntBASIC1.09□□□□□ -2.23
PRAMEF4O60810 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
PRAMEF4O60810 RNU6-448P-201ENST00000517052 107 ntBASIC1.09□□□□□ -2.23
PRAMEF4O60810 MIR548H5-201ENST00000580314 60 ntBASIC1.09□□□□□ -2.23
PRAMEF4O60810 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.08□□□□□ -2.24
PRAMEF4O60810 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 Y_RNA.290-201ENST00000364879 114 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 U7.3-201ENST00000616123 62 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 MALAT1.1-201ENST00000618249 95 ntBASIC1.08□□□□□ -2.24
PRAMEF4O60810 RNU6-535P-201ENST00000384722 107 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 MIR181B2-201ENST00000385004 89 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 MIR519A1-201ENST00000385257 85 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 SNORD63B-201ENST00000411005 70 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 AC025521.1-201ENST00000621624 286 ntBASIC1.07□□□□□ -2.24
PRAMEF4O60810 Y_RNA.32-201ENST00000362589 110 ntBASIC1.06□□□□□ -2.24
PRAMEF4O60810 RNU6-1125P-201ENST00000363601 107 ntBASIC1.06□□□□□ -2.24
PRAMEF4O60810 Y_RNA.338-201ENST00000365320 114 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms