Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 RNU6-35P-201ENST00000384530 107 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.06□□□□□ -2.58
SDCBPO00560 SNORA13-201ENST00000458790 133 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 SNORD22.1-201ENST00000516331 125 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNU6-616P-201ENST00000384353 107 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 MIR518B-201ENST00000385127 83 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNU7-164P-201ENST00000459221 62 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 AC097510.1-201ENST00000510945 133 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNY3P15-201ENST00000516297 97 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 SNORA40.15-201ENST00000516884 107 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 TRDV1-202ENST00000621643 102 ntBASIC-1.07□□□□□ -2.58
SDCBPO00560 RNU6-502P-201ENST00000362419 108 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 RNU4-17P-201ENST00000365598 141 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 MIR34C-201ENST00000384831 77 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 MIR1265-201ENST00000408444 86 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 AL500527.2-201ENST00000454105 95 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 AC021443.1-201ENST00000604478 211 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 MIR8068-201ENST00000618032 68 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.08□□□□□ -2.58
SDCBPO00560 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 RNU6-973P-201ENST00000364690 107 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 SNORD115-35-201ENST00000365122 82 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 MIR582-201ENST00000365731 98 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 RNU6-476P-201ENST00000384726 107 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 MIR517B-201ENST00000385102 67 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.09□□□□□ -2.58
SDCBPO00560 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.09□□□□□ -2.58
SDCBPO00560 SNORA40.17-201ENST00000517256 115 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.09□□□□□ -2.58
SDCBPO00560 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 RNU6-103P-201ENST00000363686 107 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 RNY3P1-201ENST00000365085 102 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 SNORD83B-201ENST00000386745 93 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 AC138393.2-201ENST00000414742 246 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.1□□□□□ -2.59
SDCBPO00560 AC138907.4-201ENST00000570107 226 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 MIR4744-201ENST00000581563 82 ntBASIC-1.1□□□□□ -2.59
SDCBPO00560 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 SNORD77B-201ENST00000391112 67 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 RNA5SP25-201ENST00000410815 110 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 AP001328.1-201ENST00000528550 176 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 MIR4282-201ENST00000583613 67 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.11□□□□□ -2.59
SDCBPO00560 SNORD36A-201ENST00000362874 73 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 RNU6-578P-201ENST00000390980 103 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 RNU6-101P-201ENST00000410323 104 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 AP000533.3-201ENST00000447704 118 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 AC022137.1-201ENST00000483735 151 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 FGF7P4-201ENST00000509595 295 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 RNU6-138P-201ENST00000515952 107 ntBASIC-1.12□□□□□ -2.59
SDCBPO00560 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 RNU6-643P-201ENST00000384018 107 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 MIR548E-201ENST00000408287 88 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 SPINT5P-201ENST00000448174 155 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 IGKV1-22-201ENST00000524313 326 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 MIR548O2-201ENST00000616090 70 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 AC090971.5-201ENST00000621102 293 ntBASIC-1.13□□□□□ -2.59
SDCBPO00560 RNU6-957P-201ENST00000363652 99 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 SNORD27-201ENST00000363981 72 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 MIR6854-201ENST00000614935 69 ntBASIC-1.14□□□□□ -2.59
SDCBPO00560 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms