Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MIR1265-201ENST00000408444 86 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 MTND5P20-201ENST00000448677 143 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 MIR4460-201ENST00000577862 86 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 AC021443.1-201ENST00000604478 211 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 AC093726.3-201ENST00000637588 150 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 RNU6-474P-201ENST00000384243 107 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 SNORD77B-201ENST00000391112 67 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 RNU7-106P-201ENST00000459514 67 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 AC138907.4-201ENST00000570107 226 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 RNU2-4P-201ENST00000606190 192 ntBASIC-0.96□□□□□ -2.56
DFFAO00273 SNORD95.1-201ENST00000364099 68 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 MT-TD-201ENST00000387419 68 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 RNU7-164P-201ENST00000459221 62 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 RNU7-2P-201ENST00000516096 62 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 RNU6-240P-201ENST00000516098 97 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.97□□□□□ -2.56
DFFAO00273 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.97□□□□□ -2.56
DFFAO00273 RNU6-472P-201ENST00000384299 107 ntBASIC-0.98□□□□□ -2.57
DFFAO00273 RNU6-35P-201ENST00000384530 107 ntBASIC-0.98□□□□□ -2.57
DFFAO00273 MIR9-2-201ENST00000384838 87 ntBASIC-0.98□□□□□ -2.57
DFFAO00273 RNU6-735P-201ENST00000410612 107 ntBASIC-0.98□□□□□ -2.57
DFFAO00273 RNU7-123P-201ENST00000515911 60 ntBASIC-0.98□□□□□ -2.57
DFFAO00273 MIR335-201ENST00000362173 94 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 RNA5SP25-201ENST00000410815 110 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 RNU4-63P-201ENST00000411313 118 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 MIR2113-201ENST00000459007 91 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 MIR4680-201ENST00000580906 66 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 AC009779.6-201ENST00000603972 165 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 MIR376B-201ENST00000614515 100 ntBASIC-0.99□□□□□ -2.57
DFFAO00273 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.01□□□□□ -2.57
DFFAO00273 SNORA51.5-201ENST00000384126 131 ntBASIC-1.01□□□□□ -2.57
DFFAO00273 MT-TY-201ENST00000387409 66 ntBASIC-1.01□□□□□ -2.57
DFFAO00273 RNU6-850P-201ENST00000516934 103 ntBASIC-1.01□□□□□ -2.57
DFFAO00273 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.02□□□□□ -2.57
DFFAO00273 AL445193.1-201ENST00000441183 141 ntBASIC-1.02□□□□□ -2.57
DFFAO00273 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.02□□□□□ -2.57
DFFAO00273 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.02□□□□□ -2.57
DFFAO00273 MIR20A-201ENST00000362279 71 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 SNORD115-35-201ENST00000365122 82 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 SNORD56B-201ENST00000384713 71 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.03□□□□□ -2.57
DFFAO00273 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 RNU6-900P-201ENST00000384498 102 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 MIR516A2-201ENST00000384888 90 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 MIR516A1-201ENST00000385033 90 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 MTATP6P21-201ENST00000440681 189 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 RNU6-287P-201ENST00000516230 98 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 AC087741.2-201ENST00000619415 172 ntBASIC-1.04□□□□□ -2.58
DFFAO00273 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 RNU6-616P-201ENST00000384353 107 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 RNY3P16-201ENST00000516338 101 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 AP000676.1-201ENST00000533307 52 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 MIR4643-201ENST00000577473 78 ntBASIC-1.05□□□□□ -2.58
DFFAO00273 MTND4P29-201ENST00000503122 1372 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNU6-275P-201ENST00000364910 107 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNU6-901P-201ENST00000384593 106 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNU6-713P-201ENST00000384761 107 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 MIR204-201ENST00000385200 110 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNU6-493P-201ENST00000391321 108 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 AC244090.1-201ENST00000441884 93 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNU6-138P-201ENST00000515952 107 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 RNA5SP395-201ENST00000516567 118 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 AC007012.1-201ENST00000567192 175 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 MIR3681-201ENST00000580089 72 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 MIR548S-201ENST00000581352 82 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 MIR4280-201ENST00000582178 76 ntBASIC-1.06□□□□□ -2.58
DFFAO00273 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 AC022028.1-201ENST00000412054 408 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 AC021146.6-201ENST00000514659 117 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 AP001328.1-201ENST00000528550 176 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 U4.1-201ENST00000620349 87 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 AL160413.1-201ENST00000622780 310 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 AC134503.1-201ENST00000633048 54 ntBASIC-1.07□□□□□ -2.58
DFFAO00273 SNORD114-15-201ENST00000364687 72 ntBASIC-1.08□□□□□ -2.58
DFFAO00273 RNU6-818P-201ENST00000364837 108 ntBASIC-1.08□□□□□ -2.58
DFFAO00273 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.08□□□□□ -2.58
DFFAO00273 MIR34C-201ENST00000384831 77 ntBASIC-1.08□□□□□ -2.58
DFFAO00273 IGKV1-22-201ENST00000524313 326 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms