Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MIR6504-201ENST00000613520 61 ntBASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 SNORD115-24-201ENST00000363528 82 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 SNORD58C-201ENST00000365223 64 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR635-201ENST00000384830 98 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR548D2-201ENST00000384955 97 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR519A1-201ENST00000385257 85 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 TRAJ51-201ENST00000504127 63 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR1255B1-201ENST00000636325 63 ntBASIC0.26□□□□□ -2.37
TRBV4-1A0A0J9YWV2 Y_RNA.49-201ENST00000362714 112 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 Y_RNA.360-201ENST00000365512 102 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR34C-201ENST00000384831 77 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 BX276092.1-201ENST00000427368 251 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR5000-201ENST00000577717 103 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 AC025166.1-201ENST00000612411 163 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNA5SP403-201ENST00000363598 108 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-726P-201ENST00000364680 107 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-571P-201ENST00000384128 107 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 AC069271.1-201ENST00000445577 156 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 AC097635.1-201ENST00000450678 155 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU7-161P-201ENST00000517289 62 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR4452-201ENST00000583004 71 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR151B-201ENST00000584249 96 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR8070-201ENST00000616510 88 ntBASIC0.24□□□□□ -2.37
TRBV4-1A0A0J9YWV2 Y_RNA.586-201ENST00000391146 98 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-848P-201ENST00000515948 107 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-617P-201ENST00000516147 107 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-473P-201ENST00000516164 107 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-1061P-201ENST00000516530 99 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR6755-201ENST00000619993 66 ntBASIC0.23□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MTND5P18-201ENST00000445624 1801 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-170P-201ENST00000362832 104 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-363P-201ENST00000362895 105 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNY4P6-201ENST00000363667 96 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 Y_RNA.344-201ENST00000365381 112 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR539-201ENST00000365690 78 ntBASIC0.22□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU4-67P-201ENST00000364569 141 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR599-201ENST00000385069 95 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 SNORD63B-201ENST00000411005 70 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-772P-201ENST00000516042 105 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1313P-201ENST00000362622 102 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.346-201ENST00000365385 112 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 SNORD50.2-201ENST00000365465 70 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-187P-201ENST00000384139 106 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 SNORD38.2-201ENST00000384470 69 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 SNORD41.1-201ENST00000391000 69 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.630-201ENST00000411370 108 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AL353813.1-201ENST00000440700 253 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1006P-201ENST00000516998 103 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU1-29P-201ENST00000606574 126 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AL162376.1-201ENST00000624117 175 ntBASIC0.2□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MT-TR-201ENST00000387439 65 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 SNORA7.5-201ENST00000410672 110 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1211P-201ENST00000459179 105 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU7-104P-201ENST00000459398 79 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1018P-201ENST00000516577 106 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-971P-201ENST00000516920 106 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-850P-201ENST00000516934 103 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.35-201ENST00000362601 101 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU7-195P-201ENST00000458793 62 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.703-201ENST00000516846 111 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
TRBV4-1A0A0J9YWV2 AL157777.2-201ENST00000258070 137 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.116-201ENST00000363292 103 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.342-201ENST00000365352 113 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-1062P-201ENST00000383908 107 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNA5SP193-201ENST00000410353 107 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU7-107P-201ENST00000459121 61 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU7-106P-201ENST00000459514 67 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.17□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.16□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.362-201ENST00000365518 110 ntBASIC0.16□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-746P-201ENST00000384112 109 ntBASIC0.16□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-409P-201ENST00000384114 104 ntBASIC0.16□□□□□ -2.38
TRBV4-1A0A0J9YWV2 RNU6-80P-201ENST00000384195 107 ntBASIC0.16□□□□□ -2.38
TRBV4-1A0A0J9YWV2 Y_RNA.507-201ENST00000384500 99 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms