Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.24□□□□□ -2.61
TRAV12-1A0A0B4J245 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.24□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR582-201ENST00000365731 98 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 SNORD64-201ENST00000386683 67 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 AL121914.1-201ENST00000450188 156 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 RNA5SP236-201ENST00000516169 116 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.25□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-24P-201ENST00000384440 107 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNA5SP25-201ENST00000410815 110 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU7-164P-201ENST00000459221 62 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-277P-201ENST00000516272 106 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 AC138907.4-201ENST00000570107 226 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 AC021443.1-201ENST00000604478 211 ntBASIC-1.26□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-616P-201ENST00000384353 107 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR34C-201ENST00000384831 77 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR1265-201ENST00000408444 86 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 AC097510.1-201ENST00000510945 133 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 SERF1AP1-201ENST00000514575 187 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU7-123P-201ENST00000515911 60 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-240P-201ENST00000516098 97 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR548O2-201ENST00000616090 70 ntBASIC-1.27□□□□□ -2.61
TRAV12-1A0A0B4J245 SNORD27-201ENST00000363981 72 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-905P-201ENST00000384434 107 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR147A-201ENST00000385079 72 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-876P-201ENST00000391295 104 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 SNORD2.1-201ENST00000458762 69 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 AC026407.1-201ENST00000518369 204 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.28□□□□□ -2.61
TRAV12-1A0A0B4J245 RNU6-103P-201ENST00000363686 107 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-10P-201ENST00000384036 107 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 MT-TL1-201ENST00000386347 75 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR216B-201ENST00000390186 82 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-243P-201ENST00000391140 107 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 RN7SKP19-201ENST00000516016 252 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-762P-201ENST00000517107 102 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 AL365265.1-201ENST00000621045 234 ntBASIC-1.29□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORD36A-201ENST00000362874 73 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU4-17P-201ENST00000365598 141 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-651P-201ENST00000411040 105 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 AC138393.2-201ENST00000414742 246 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 AL353813.1-201ENST00000440700 253 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORA40.15-201ENST00000516884 107 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 AL442663.2-201ENST00000554385 511 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 snoR1.1-201ENST00000628177 80 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR382-201ENST00000637119 76 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR1302-1-201ENST00000637932 143 ntBASIC-1.3□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-450P-201ENST00000364654 107 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORD114-15-201ENST00000364687 72 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR1252-201ENST00000408861 65 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORD18.2-201ENST00000459604 70 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 AC080013.6-201ENST00000606185 215 ntBASIC-1.31□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-957P-201ENST00000363652 99 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-770P-201ENST00000363929 105 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORD38.2-201ENST00000384470 69 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-823P-201ENST00000391042 103 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-592P-201ENST00000411333 103 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 SNORD19B-201ENST00000459623 84 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR4744-201ENST00000581563 82 ntBASIC-1.32□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 MIR587-201ENST00000384845 96 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 ELOCP20-201ENST00000422460 345 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.33□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 RNU6-623P-201ENST00000363143 105 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.34□□□□□ -2.62
TRAV12-1A0A0B4J245 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 237.5 ms